Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_E01
         (304 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z387 Cluster: Putative uncharacterized protein; n=1; ...    33   1.3  
UniRef50_Q6UNI1 Cluster: Replication-associated protein; n=4; Po...    31   3.8  
UniRef50_Q4TBF6 Cluster: Chromosome undetermined SCAF7132, whole...    30   8.8  
UniRef50_Q2IKZ4 Cluster: FHA domain containing protein; n=1; Ana...    30   8.8  
UniRef50_A1FXQ0 Cluster: Beta-lactamase-like; n=11; Gammaproteob...    30   8.8  
UniRef50_Q0U5F3 Cluster: Putative uncharacterized protein; n=1; ...    30   8.8  

>UniRef50_Q4Z387 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium berghei|Rep: Putative uncharacterized
          protein - Plasmodium berghei
          Length = 83

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 13 FLKVNLDYYFFFSCEPLEYIYIYN 84
          F+ +N+ YYFFF    L YIYIY+
Sbjct: 9  FIFINMTYYFFFFRFKLSYIYIYS 32


>UniRef50_Q6UNI1 Cluster: Replication-associated protein; n=4;
           Potexvirus|Rep: Replication-associated protein - Opuntia
           virus X
          Length = 1555

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = -2

Query: 246 NPTDARVFLHLVLLPRPLPTVHLMLHLKRWTLLQLIP*KLPTPFASAPLRA 94
           NP D  + L ++ + + LPT+   +     TL Q+   +LPTPF   PLRA
Sbjct: 748 NPNDGALILPIMSIQK-LPTLECSIPSLNQTLKQIH--RLPTPFLPDPLRA 795


>UniRef50_Q4TBF6 Cluster: Chromosome undetermined SCAF7132, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF7132, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 396

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 166 EALDPSSTDSLETSHSFCI-CASSSFIVNYIC 74
           E++DP+   +LE  HSFC  C   +F+   +C
Sbjct: 211 ESVDPTRRTTLECKHSFCAGCLGRAFLQKPVC 242


>UniRef50_Q2IKZ4 Cluster: FHA domain containing protein; n=1;
           Anaeromyxobacter dehalogenans 2CP-C|Rep: FHA domain
           containing protein - Anaeromyxobacter dehalogenans
           (strain 2CP-C)
          Length = 327

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/32 (50%), Positives = 16/32 (50%)
 Frame = -2

Query: 276 RSTHRAARGENPTDARVFLHLVLLPRPLPTVH 181
           R  HR A GE     R  L L  LPRP P VH
Sbjct: 191 RRPHRLAVGEEIRVGRQLLRLEPLPRPPPAVH 222


>UniRef50_A1FXQ0 Cluster: Beta-lactamase-like; n=11;
           Gammaproteobacteria|Rep: Beta-lactamase-like -
           Stenotrophomonas maltophilia R551-3
          Length = 493

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 23/70 (32%), Positives = 30/70 (42%)
 Frame = -2

Query: 300 WRRRACLPRSTHRAARGENPTDARVFLHLVLLPRPLPTVHLMLHLKRWTLLQLIP*KLPT 121
           W+R A   RS+ R      P  AR +  +   PRP    H    +   T   L+P  L  
Sbjct: 147 WKRTATRSRSSPRRTDARPPGMARRYPPVE--PRPRSARHPPQGIPMRTAALLLPLALAA 204

Query: 120 PFASAPLRAS 91
            F SAPL A+
Sbjct: 205 TFTSAPLLAA 214


>UniRef50_Q0U5F3 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 793

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -2

Query: 288 ACLPRSTHRAARGENPTDARVFLHLVLLPRPLPTVHLMLHLKRWTLLQLIP 136
           A + RS +  A  +NPT  R++ HL +L RP     L  + +  T ++  P
Sbjct: 415 AGVARSWYTKAADKNPTVGRLYHHLAILARPNALQQLYYYSRSLTCVKPFP 465


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,611,749
Number of Sequences: 1657284
Number of extensions: 3285810
Number of successful extensions: 8531
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8529
length of database: 575,637,011
effective HSP length: 77
effective length of database: 448,026,143
effective search space used: 10304601289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)