Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_E01
         (304 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      20   5.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   5.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   5.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    19   8.7  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 246 NPTDARVFLHLVL 208
           NP+  R FLH+ L
Sbjct: 158 NPSQKRQFLHITL 170


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 31  DYYFFFSCEPLEYI 72
           DY FF   EP+ Y+
Sbjct: 144 DYVFFVENEPILYL 157


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 218 ILFCSLALFQQC 183
           +++CSLA+F  C
Sbjct: 413 LVYCSLAIFVLC 424


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 277 WEACSPPPP 303
           W+A SPP P
Sbjct: 66  WQANSPPSP 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,858
Number of Sequences: 336
Number of extensions: 825
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)