Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_E01
         (304 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064981-1|AAH64981.1|  951|Homo sapiens coiled-coil and C2 doma...    29   2.7  
BC048345-1|AAH48345.1|  388|Homo sapiens CC2D1A protein protein.       29   2.7  
AK026371-1|BAB15464.1|  295|Homo sapiens protein ( Homo sapiens ...    29   2.7  
AB097002-1|BAC77355.1|  951|Homo sapiens putative NFkB activatin...    29   2.7  
AK000482-1|BAA91194.1|  572|Homo sapiens protein ( Homo sapiens ...    28   4.7  
AF536205-1|AAN04488.1|  950|Homo sapiens hypothetical protein pr...    28   4.7  

>BC064981-1|AAH64981.1|  951|Homo sapiens coiled-coil and C2 domain
           containing 1A protein.
          Length = 951

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -2

Query: 288 ACLPRSTHRAARGENPTDARVFLHLVLLPRPLPTVHLMLHLKRWTLLQLIP*KLPTPFA 112
           AC  R       G  PT  R+ + +V +  PL    L    +RW ++  +P  +PT  A
Sbjct: 764 ACEVREILEVLDGRRPTGGRLEV-MVRIREPLTAQQLETTTERWLVIDPVPAAVPTQVA 821


>BC048345-1|AAH48345.1|  388|Homo sapiens CC2D1A protein protein.
          Length = 388

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -2

Query: 288 ACLPRSTHRAARGENPTDARVFLHLVLLPRPLPTVHLMLHLKRWTLLQLIP*KLPTPFA 112
           AC  R       G  PT  R+ + +V +  PL    L    +RW ++  +P  +PT  A
Sbjct: 201 ACEVREILEVLDGRRPTGGRLEV-MVRIREPLTAQQLETTTERWLVIDPVPAAVPTQVA 258


>AK026371-1|BAB15464.1|  295|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22718 fis, clone HSI13748. ).
          Length = 295

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -2

Query: 288 ACLPRSTHRAARGENPTDARVFLHLVLLPRPLPTVHLMLHLKRWTLLQLIP*KLPTPFA 112
           AC  R       G  PT  R+ + +V +  PL    L    +RW ++  +P  +PT  A
Sbjct: 108 ACEVREILEVLDGRRPTGGRLEV-MVRIREPLTAQQLETTTERWLVIDPVPAAVPTQVA 165


>AB097002-1|BAC77355.1|  951|Homo sapiens putative NFkB activating
           protein protein.
          Length = 951

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -2

Query: 288 ACLPRSTHRAARGENPTDARVFLHLVLLPRPLPTVHLMLHLKRWTLLQLIP*KLPTPFA 112
           AC  R       G  PT  R+ + +V +  PL    L    +RW ++  +P  +PT  A
Sbjct: 764 ACEVREILEVLDGRRPTGGRLEV-MVRIREPLTAQQLETTTERWLVIDPVPAAVPTQVA 821


>AK000482-1|BAA91194.1|  572|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20475 fis, clone KAT07206. ).
          Length = 572

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -2

Query: 288 ACLPRSTHRAARGENPTDARVFLHLVLLPRPLPTVHLMLHLKRWTLLQLIP*KLPT 121
           AC  R       G  PT  R+ + +V +  PL    L    +RW ++  +P  +PT
Sbjct: 386 ACEVREILEVLDGRRPTGGRLEV-MVRIREPLTAQQLETTTERWLVIDPVPAAVPT 440


>AF536205-1|AAN04488.1|  950|Homo sapiens hypothetical protein
           protein.
          Length = 950

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -2

Query: 288 ACLPRSTHRAARGENPTDARVFLHLVLLPRPLPTVHLMLHLKRWTLLQLIP*KLPT 121
           AC  R       G  PT  R+ + +V +  PL    L    +RW ++  +P  +PT
Sbjct: 764 ACEVREILEVLDGRRPTGGRLEV-MVRIREPLTAQQLETTTERWLVIDPVPAAVPT 818


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,230,289
Number of Sequences: 237096
Number of extensions: 519282
Number of successful extensions: 1097
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)