Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D24
         (421 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   0.69 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   0.69 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   0.69 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.4  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 0.69
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 213 GNERKRKYAEFYRTYDAEKEF 275
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 0.69
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 213 GNERKRKYAEFYRTYDAEKEF 275
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 0.69
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 213 GNERKRKYAEFYRTYDAEKEF 275
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 158  NVTFDDGVEETSHLRLARCRYCTF 87
            N   D+G  E S  +L +C  CT+
Sbjct: 1069 NAQDDEGGLEFSVNKLFKCMICTY 1092


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 158  NVTFDDGVEETSHLRLARCRYCTF 87
            N   D+G  E S  +L +C  CT+
Sbjct: 1069 NAQDDEGGLEFSVNKLFKCMICTY 1092


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,197
Number of Sequences: 336
Number of extensions: 1283
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)