Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D23
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       41   1e-05
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    26   0.34 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.3  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   9.7  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 40.7 bits (91), Expect = 1e-05
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
 Frame = +3

Query: 192 RQSYWPLGGRNLSKTVVRNCLKCFRYRAQNVQPIMGQLPKTRTDLQFPFLNCSVDYAGPI 371
           R+ YWP   R + K + R+C  C + ++ N +P  G L     D     L C VD+ GP+
Sbjct: 154 REYYWPNMYRTIKKRL-RSCDLCQKTKSSN-RPHQGPLTPILYD-HIGDLVC-VDFYGPL 209

Query: 372 LIADRKGRGCKLVKSYLCIFVCLAVKAVHIELVTALSSEAYIAALKRFVSRRG--KPRSI 545
                 GR   L  SY  +FV + V +  ++L     + A IAA +      G  KP+ +
Sbjct: 210 ----PTGR---LGASY--VFVVIDVFSKFLKLYPLRKATAKIAAKRLIEDFSGYIKPKCV 260

Query: 546 WSDNGTNFVGACNELKGVLSNSDIASFMS 632
            SD+GT F+   N  +  L  +DI   +S
Sbjct: 261 LSDHGTQFIS--NTWQNSLRAADIQPTLS 287


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 622 DAMSEFERTPLSSLQAPTKFVP 557
           D +   E+TPLSS+  P+ F P
Sbjct: 12  DMLDSQEKTPLSSVSYPSMFTP 33


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 217 AEICLRLSSETA*NVLGIEHKMFNPSWVNYLKLVLIYNFL 336
           + +C  +S+E   N+L + H+ F    +  L+L  I N L
Sbjct: 269 SHVCQNVSTEVIGNILRLMHRRFE---ITALRLFTIDNKL 305


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 508 KDSCLVEASPAAYG 549
           KD C+V+A+ A+YG
Sbjct: 114 KDWCVVDATFASYG 127


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 508 KDSCLVEASPAAYG 549
           KD C+V+A+ A+YG
Sbjct: 114 KDWCVVDATFASYG 127


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +3

Query: 315 RTDLQFPFLNCSVDYAGPILIADRKGRGCKLVKS 416
           R D   P++    D   P+L +   GR  K + S
Sbjct: 38  RPDFVAPYIKVEADEEAPVLKSRSFGRKRKSISS 71


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,516
Number of Sequences: 336
Number of extensions: 3464
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)