Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D23
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...   172   8e-45
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     34   0.004
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    26   1.3  
AJ973470-1|CAJ01517.1|  117|Anopheles gambiae hypothetical prote...    24   5.3  
AJ697733-1|CAG26926.1|  117|Anopheles gambiae putative chemosens...    24   5.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.0  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   9.2  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score =  172 bits (419), Expect = 8e-45
 Identities = 91/237 (38%), Positives = 133/237 (56%), Gaps = 7/237 (2%)
 Frame = +3

Query: 6    LTPFIDSNSILRVGGRLDNSPYDFNIKHPIVHCSKHALTKXXXXXXXXXXXXXXXXXXXX 185
            + P +D ++++RVGGRL N+      KHP++   KH + +                    
Sbjct: 1312 IRPILDKDNVMRVGGRLSNADIKDEQKHPVIIPGKHRIAELIADKYHKILRHAGAQLMIN 1371

Query: 186  XIRQSYWPLGGRNLSKTVVRNCLKCFRYRAQNVQPIMGQLPKTRTDLQFPFLNCSVDYAG 365
             ++  +W +G RN++K  V NC+KC R R + +Q  M  LP+ R     PF    VDYAG
Sbjct: 1372 TMQLRFWIVGARNVAKRTVFNCVKCTRCRPKLIQQPMADLPEQRVRQARPFSISGVDYAG 1431

Query: 366  PILIADRKGRGCKLVKSYLCIFVCLAVKAVHIELVTALSSEAYIAALKRFVSRRGKPRSI 545
            PI++     R     K Y+ IFVC   KAVHIELV+ L+S A++AAL+RFV+RRG    +
Sbjct: 1432 PIMVKGTHRRAVP-TKGYISIFVCFVTKAVHIELVSNLTSSAFLAALRRFVARRGHVTEL 1490

Query: 546  WSDNGTNFVGACNELKGV--LSNSD-----IASFMSQEGIDFNFSPPYSPHFNGLAE 695
             SDNGTNF GA N+L+ +  L NSD     +  + ++  + + F+PP +PHF GL E
Sbjct: 1491 HSDNGTNFRGANNKLRELYKLLNSDTHQDEVVGWCAERDMKWKFTPPAAPHFGGLWE 1547


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 34.3 bits (75), Expect = 0.004
 Identities = 22/55 (40%), Positives = 26/55 (47%)
 Frame = +3

Query: 531 KPRSIWSDNGTNFVGACNELKGVLSNSDIASFMSQEGIDFNFSPPYSPHFNGLAE 695
           KPR I SD G           G  SN  +  F + EGI   F+  YSP  NG+AE
Sbjct: 401 KPRIIRSDQG-----------GEYSNKALRKFCADEGIKMEFTAAYSPQQNGVAE 444


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 558 GTNFVGACNELKGVLSNSDIASFMSQEGIDFNFSPPYSPHFNGLAE 695
           G N +   ++  G   +  +  F   +GI   F+  YSP  NG+AE
Sbjct: 134 GRNPIVIRSDQGGEYKSKRLGQFYRAKGIVPQFTAGYSPQQNGVAE 179


>AJ973470-1|CAJ01517.1|  117|Anopheles gambiae hypothetical protein
           protein.
          Length = 117

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 225 LSKTVVRNCLKCFRYRAQNVQPI 293
           L + + RNC  C   +AQN Q +
Sbjct: 73  LPEVIQRNCRNCSPQQAQNAQKL 95


>AJ697733-1|CAG26926.1|  117|Anopheles gambiae putative chemosensory
           protein CSP4 protein.
          Length = 117

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 225 LSKTVVRNCLKCFRYRAQNVQPI 293
           L + + RNC  C   +AQN Q +
Sbjct: 73  LPEVIQRNCRNCSPQQAQNAQKL 95


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 571  LVLATNSKASFQTQTLRHSCLKK 639
            LV AT ++   QT+ +RH+ L++
Sbjct: 1798 LVTATKTRKKQQTEAIRHAMLQQ 1820


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 186 ELVRAVVQHVRDANVQNGIL 127
           + VR + QH++DA+  N I+
Sbjct: 432 QAVRFIAQHIKDADKDNEIV 451


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,814
Number of Sequences: 2352
Number of extensions: 15419
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)