Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D14
         (808 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -1

Query: 466 LRLLVSICFQTFFSNSFSFCILFLVTRTK*INVVVIVVFRC 344
           + LL+ +C   F+     FC  F++     + ++ I  F C
Sbjct: 250 VHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYC 290


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +2

Query: 623 NKLQIMCVIEDDKVSVDLLTEKIQEFEDFV-QSVDIAAFNKI*TAITCNIFIS 778
           N+L  +C + D+K+S  +LT  +  F   + Q  +    +K  T  T   FIS
Sbjct: 272 NRLCHLCFLLDEKLSYIILTSFLNNFYFIIFQVFESFYLHKATTLETVYYFIS 324


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 23  IFSPSPCGYLEKVATLKETMAVGDVKTAQGLNDLNQYLA 139
           +F   P    EKV  LKE      V+  Q L+ L+  LA
Sbjct: 230 LFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKLA 268


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 23  IFSPSPCGYLEKVATLKETMAVGDVKTAQGLNDLNQYLA 139
           +F   P    EKV  LKE      V+  Q L+ L+  LA
Sbjct: 186 LFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKLA 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,153
Number of Sequences: 336
Number of extensions: 3814
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)