Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D14
         (808 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631...   161   5e-40
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890...   160   1e-39
07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615...   149   2e-36
01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637...    36   0.029

>03_04_0016 +
           16461542-16461566,16462701-16462732,16463015-16463100,
           16463189-16463305,16463399-16463474,16463695-16463818,
           16464482-16464595,16464700-16464947
          Length = 273

 Score =  161 bits (392), Expect = 5e-40
 Identities = 98/230 (42%), Positives = 126/230 (54%), Gaps = 8/230 (3%)
 Frame = +2

Query: 80  MAVGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIA 259
           + + +V +  GL  L++YL  +SY+SGY  S+ D+ VF  +  APAA+  +V RWY+ I+
Sbjct: 22  ITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHIS 81

Query: 260 -----SYTSAERKTWSQGTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXX 424
                S  +AE +     ++                      VDLFG             
Sbjct: 82  ALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEE- 140

Query: 425 XXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLV 604
                +A A K S K     KSS+LLDVKPWDDETDM ++E  VR ++MEGLLWGASKLV
Sbjct: 141 -----RAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLV 195

Query: 605 PVGYGINKLQIMCVIEDDKVSVDLLTEK---IQEFEDFVQSVDIAAFNKI 745
           PVGYGI KLQIM  I DD VSVD L E     +   +F+QS DI AFNKI
Sbjct: 196 PVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEFIQSCDIVAFNKI 245


>07_03_1580 +
           27888275-27888360,27888755-27888871,27888964-27889045,
           27889710-27889821,27889958-27890071,27890163-27890326
          Length = 224

 Score =  160 bits (389), Expect = 1e-39
 Identities = 97/225 (43%), Positives = 123/225 (54%), Gaps = 7/225 (3%)
 Frame = +2

Query: 92  DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTS 271
           D+ TA GL  L Q+L+ K+YVSG   S+ D++VF  V   P A  P+  RWY+ +A+  +
Sbjct: 7   DLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALA 66

Query: 272 AERKTWSQGTS----PLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXXL 439
           +     + G +                          +DLFG                  
Sbjct: 67  SRFPGKAVGVNLPGGGAASSAAAAAPAAKDADEDDDDLDLFGDETEEDKKAAD------- 119

Query: 440 KAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYG 619
           +  A K S K     KSS+LLDVKPWDDETDMK++E  VR+++MEGL WGASKLVPVGYG
Sbjct: 120 ERAASKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYG 179

Query: 620 INKLQIMCVIEDDKVSVD-LLTEKIQE--FEDFVQSVDIAAFNKI 745
           I KLQIM  I DD VSVD L+ E + E    +FVQS DI AFNKI
Sbjct: 180 IKKLQIMLTIVDDLVSVDSLIEEHLTEEPINEFVQSCDIVAFNKI 224


>07_03_1260 -
           25260872-25261101,25261199-25261312,25261473-25261596,
           25261755-25261839,25261917-25262033,25262122-25262207
          Length = 251

 Score =  149 bits (362), Expect = 2e-36
 Identities = 94/229 (41%), Positives = 119/229 (51%), Gaps = 11/229 (4%)
 Frame = +2

Query: 92  DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQI----- 256
           +V +  GL  L++YL  +SY+SGY  S  D+ V+     AP+++  +V RW+  I     
Sbjct: 7   NVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLR 66

Query: 257 ASYTSAER---KTWSQGTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXX 427
            S  +A+    K  S                          VDLFG              
Sbjct: 67  LSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEE-- 124

Query: 428 XXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVP 607
               +A A K S K     KSS+LLDVKPWDDETDM ++E  VR ++MEGLLWGASKLVP
Sbjct: 125 ----RAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVP 180

Query: 608 VGYGINKLQIMCVIEDDKVSVDLLTEK---IQEFEDFVQSVDIAAFNKI 745
           VGYGI KLQIM  I DD VSVD L E     +   +++QS DI AFNKI
Sbjct: 181 VGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229


>01_06_1167 -
           35062766-35062870,35063165-35063228,35063647-35063738,
           35064137-35064205,35064322-35064412,35064509-35064732,
           35065064-35065180,35065583-35065651,35066172-35066237,
           35066335-35066505,35066581-35066661,35067620-35067700
          Length = 409

 Score = 36.3 bits (80), Expect = 0.029
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
 Frame = +2

Query: 113 LNDLNQYLAEKSYV--SGYTPSQADVQVFEQV-------GKAPAANLPHVLRWYNQI 256
           L +LNQ L++KS +  +G+ PS AD+ VF  +       G+      PHVLRW + I
Sbjct: 76  LGNLNQDLSQKSVLLGNGFKPSVADIVVFATIQVFVSHLGENELQKYPHVLRWMDYI 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,187,658
Number of Sequences: 37544
Number of extensions: 404134
Number of successful extensions: 1054
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)