Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_D13
(833 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 75 1e-14
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 54 3e-08
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 49 9e-07
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 48 2e-06
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 46 7e-06
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 46 7e-06
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 43 6e-05
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 42 1e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 42 1e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 38 0.002
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 38 0.002
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 34 0.022
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 33 0.050
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 30 0.47
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 2.5
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 27 4.3
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 5.7
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 26 5.7
SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster... 26 5.7
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 26 7.6
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 26 7.6
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 74.9 bits (176), Expect = 1e-14
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Frame = +2
Query: 293 CGYACGTNGELRQHRAIHSDDKPFVCD--KCDKTFKTYSNLKTHMDIHEDTS-YECFI-- 457
CG L QH HS+++PFVCD C K F S+LK H H + + C
Sbjct: 30 CGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDG 89
Query: 458 CRRVLNSRRTLRKHLLVHEDKCRHVCSY--CNKAFKRRQTLKVHM---YTHTGVKPLTCK 622
C +++ L +H+ VH + C++ C++ F + Q L+ H+ +TH P T +
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQ 149
Query: 623 LCDERFAYASTLRSHRMRCHPELM 694
C+ RFA L++H R H +++
Sbjct: 150 DCELRFATKQKLQNHVNRAHEKII 173
Score = 56.4 bits (130), Expect = 5e-09
Identities = 60/241 (24%), Positives = 91/241 (37%), Gaps = 18/241 (7%)
Frame = +2
Query: 8 FSCDK--CPRITKTLSAMNKHKFKHIPKADRKYPCSSCEKTFKTKETLKSHERSHIPVQE 181
F CD C + S + HK H C+ F T++ L+ H H ++
Sbjct: 53 FVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVH---RK 109
Query: 182 RKIFNC--EVCNMKFTTXXXXXXXXXXXXDKIKAYVCDL--CGYACGTNGELRQH-RAIH 346
K + C E C+ F+ + Y C C T +L+ H H
Sbjct: 110 PKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAH 169
Query: 347 SDDKPFVC--DKC--DKTFKTYSNLKTHMDIHEDTSYECFICRRVLNSRRTLRKHLLVH- 511
+ C + C + F+ +S L+ H I E C IC R + LR H+++H
Sbjct: 170 EKIISYSCPHESCVGHEGFEKWSQLQNH--IREAHVPSCSICGRQFKTAAHLRHHVVLHQ 227
Query: 512 ---EDKCRHVCSY--CNKAFKRRQTLKVHMYT-HTGVKPLTCKLCDERFAYASTLRSHRM 673
E++ + C C K+F R LK H+ H G C C +F Y L+ H
Sbjct: 228 TTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLE 287
Query: 674 R 676
R
Sbjct: 288 R 288
Score = 55.2 bits (127), Expect = 1e-08
Identities = 64/241 (26%), Positives = 97/241 (40%), Gaps = 21/241 (8%)
Frame = +2
Query: 8 FSC--DKCPRITKTLSAMNKHKFKHIPKADRKYPC--SSCEKTFKTKETLKSHERSHIPV 175
F C ++C + S + +H H +R + C + C K F K LK H+R H V
Sbjct: 23 FHCPYEECGKKYSRPSLLEQHLRTH--SNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNV 80
Query: 176 QERKIFNC--EVCNMKFTTXXXXXXXXXXXXDKIKAYVC--DLCGYACGTNGELRQH-RA 340
K F+C + C+ +F T K K Y C + C + +LR H A
Sbjct: 81 ---KPFSCHYDGCDAQFYTQQHLERHIEVHR-KPKPYACTWEGCDECFSKHQQLRSHISA 136
Query: 341 IHSDDKPFVC--DKCDKTFKTYSNLKTHMD-IHED-TSYECFICRRVLNSRRTLRKHLLV 508
H+ P+ C C+ F T L+ H++ HE SY C + + L
Sbjct: 137 CHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSC-PHESCVGHEGFEKWSQLQ 195
Query: 509 HEDKCRHV--CSYCNKAFKRRQTLKVHMYTHTGV----KPLTCKL--CDERFAYASTLRS 664
+ + HV CS C + FK L+ H+ H K C + C + F +S L+
Sbjct: 196 NHIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKK 255
Query: 665 H 667
H
Sbjct: 256 H 256
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 53.6 bits (123), Expect = 3e-08
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +2
Query: 401 SNLKTHMDIHEDTSYECFI--CRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTL 574
S+ K + +Y C C + L+ H+ H + CS C K+F R+
Sbjct: 556 SSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDK 615
Query: 575 KVHMYTHTGVKPLTCKLCDERFAYASTLRSH 667
+ H HTG+K C C++RFA L H
Sbjct: 616 RRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 48.8 bits (111), Expect = 9e-07
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 377 CDKTFKTYSNLKTHMDIHED-TSYECFICRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKA 553
C+K F NLK+HM+ H + ++C IC++ + R+H +H C CN+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 554 FKRRQTLKVHMYTHTG 601
F R L H + G
Sbjct: 637 FARMDALNRHYKSEVG 652
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 278 YVCDL--CGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMDIHED-TSYE 448
YVC C L+ H H++ +PF C C K+F + + H +H ++
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFA 629
Query: 449 CFICRRVLNSRRTLRKH 499
C C + L +H
Sbjct: 630 CVTCNQRFARMDALNRH 646
Score = 35.9 bits (79), Expect = 0.007
Identities = 20/97 (20%), Positives = 37/97 (38%)
Frame = +2
Query: 128 KTKETLKSHERSHIPVQERKIFNCEVCNMKFTTXXXXXXXXXXXXDKIKAYVCDLCGYAC 307
K++ + S +S Q + CN +FT + + + C +C +
Sbjct: 551 KSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTN-YRPFQCSICKKSF 609
Query: 308 GTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTH 418
+ R+H +H+ K F C C++ F L H
Sbjct: 610 ARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 92 RKYPCSSCEKTFKTKETLKSHERSHIPVQERKIFNCEVCNMKF 220
R + CS C+K+F + + HE+ H + K F C CN +F
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLHTGI---KAFACVTCNQRF 637
Score = 33.5 bits (73), Expect = 0.038
Identities = 24/92 (26%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 65 KFKHIPKADRKYPCS--SCEKTFKTKETLKSHERSHIPVQERKIFNCEVCNMKFTTXXXX 238
K K K+ Y C+ C K F LKSH +H + F C +C F
Sbjct: 559 KAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTH---TNYRPFQCSICKKSFARQHDK 615
Query: 239 XXXXXXXXDKIKAYVCDLCGYACGTNGELRQH 334
IKA+ C C L +H
Sbjct: 616 RRHEQLHTG-IKAFACVTCNQRFARMDALNRH 646
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 48.8 bits (111), Expect = 9e-07
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +2
Query: 428 HEDTSYECFICRRVLNSRRTLRKHL----LVHEDKCRHVCSYCNKAFKRRQTLKVHMYTH 595
H + + RR SR+ + H R+ C+ C + F R +LK+H Y+H
Sbjct: 431 HHNNDKRAHVSRRHSTSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSH 490
Query: 596 TGVKPLTCKL--CDERFAYASTLRSHRMRCH 682
TG +P C C + F S +R H+ R H
Sbjct: 491 TGERPFVCDYAGCGKAFNVRSNMRRHQ-RIH 520
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 278 YVCDLCGYACGTNGELRQHRAIHSDDKPFVCD--KCDKTFKTYSNLKTHMDIH 430
Y C C L+ H H+ ++PFVCD C K F SN++ H IH
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 29.9 bits (64), Expect = 0.47
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 8 FSCDKCPRITKTLSAMNKHKFKHIPKADRKYPC--SSCEKTFKTKETLKSHERSH 166
+ C +C + S++ H + H +R + C + C K F + ++ H+R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHT--GERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 47.6 bits (108), Expect = 2e-06
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +2
Query: 353 DKPFVC--DKCDKTFKTYSNLKTHMDIH-EDTSYECFICRRVLNSRRTLRKHLLVHEDKC 523
D +VC + C+K N+++H+ H D Y C +C+ L++HL +HE+
Sbjct: 440 DGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGR 499
Query: 524 RHVCSYCNKAFKRRQTLKVH 583
+VC C K F R L H
Sbjct: 500 PYVCE-CLKRFNRLDALNRH 518
Score = 42.3 bits (95), Expect = 8e-05
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 278 YVC--DLCGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMDIHED-TSYE 448
YVC + C + H H D+P+ CD C F + +LK H+ IHE+ Y
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYV 502
Query: 449 CFICRRVLNSRRTLRKH 499
C C + N L +H
Sbjct: 503 C-ECLKRFNRLDALNRH 518
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 524 RHVCSY--CNKAFKRRQTLKVHMYTHTGVKPLTCKLCDERFAYASTLRSHRMRCH 682
++VC Y CNK R+ ++ H+ TH +P C LC F L+ H +R H
Sbjct: 442 KYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRH-LRIH 495
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 272 KAYVCDLCGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTH 418
+ Y CDLC + +L++H IH + +P+VC+ C K F L H
Sbjct: 471 RPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 86 ADRKYPCSSCEKTFKTKETLKSHERSH 166
+DR Y C C+ F LK H R H
Sbjct: 469 SDRPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.0 bits (104), Expect = 7e-06
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 272 KAYVCDLCGYACGTNGELRQH-RAIHSDDKPFVCDKCDKTFKTYSNLKTHMDIHEDTS 442
K++VC C + LR+H R++H+ +KPFVC C K F NL+ H +H + S
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNAS 477
Score = 43.6 bits (98), Expect = 4e-05
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 530 VCSYCNKAFKRRQTLKVHMYT-HTGVKPLTCKLCDERFAYASTLRSHRMRCH 682
VC C+K FKR + L+ H+ + HT KP C +C +RF+ LR H R H
Sbjct: 424 VCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHE-RLH 473
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 356 KPFVCDKCDKTFKTYSNLKTHM-DIHEDTSYECFICRRVLNSRRTLRKHLLVH 511
K FVC +C K FK +L+ H+ +H IC + + R LR+H +H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQHERLH 473
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 2 ESFSCDKCPRITKTLSAMNKHKFKHIPKADRKYPCSSCEKTFKTKETLKSHERSHIPVQE 181
+SF C +C + K + +H + + +++ + C C K F ++ L+ HER H+
Sbjct: 421 KSFVCPECSKKFKRSEHLRRH-IRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNASP 478
Query: 182 R 184
R
Sbjct: 479 R 479
Score = 34.7 bits (76), Expect = 0.016
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +2
Query: 440 SYECFICRRVLNSRRTLRKHLL-VHEDKCRHVCSYCNKAFKRRQTLKVHMYTHTGVKP-L 613
S+ C C + LR+H+ +H + VC C K F RR L+ H H P L
Sbjct: 422 SFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRL 480
Query: 614 TC 619
C
Sbjct: 481 AC 482
Score = 32.3 bits (70), Expect = 0.087
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +2
Query: 128 KTKETLKSHERSHIPVQER-KIFNCEVCNMKFTTXXXXXXXXXXXXDKIKAYVCDLCGYA 304
+ K S+ ++ +P K F C C+ KF K +VC +CG
Sbjct: 401 RRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKR 459
Query: 305 CGTNGELRQHRAIHSDDKP 361
LRQH +H + P
Sbjct: 460 FSRRDNLRQHERLHVNASP 478
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 46.0 bits (104), Expect = 7e-06
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 476 SRRTLRKHLLVHE-DKCRHVCSY--CNKAFKRRQTLKVHMYTHTGVKPLTCKLCDERFAY 646
+ + L+K H R C+Y C K+F R++ L+ H TH VK +C C+ FA
Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFAR 67
Query: 647 ASTLRSHRMRCH 682
+ L H + H
Sbjct: 68 SDVLNRHVQQMH 79
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 89 DRKYPCS--SCEKTFKTKETLKSHERSHIPVQERKIFNCEVCNMKF 220
D ++ C+ C K+F KE L+ HER+H + K F+C CN F
Sbjct: 23 DPRFYCTYPDCPKSFTRKEHLRRHERTH---ENVKAFSCSFCNRAF 65
Score = 36.7 bits (81), Expect = 0.004
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 458 CRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHM 586
C + + LR+H HE+ CS+CN+AF R L H+
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHV 75
Score = 29.1 bits (62), Expect = 0.81
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +2
Query: 323 LRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMDIHEDTSYECFICRRVLNSRRTLRKHL 502
LR+H H + K F C C++ F L H+ + RR+LN+ L +
Sbjct: 43 LRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ-QMHLQKQNLSERRMLNASCFLGFCV 101
Query: 503 LVHE 514
L H+
Sbjct: 102 LAHD 105
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 42.7 bits (96), Expect = 6e-05
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 533 CSYCNKAFKRRQTLKVHMYTHTGVKPLTCKL--CDERFAYASTLRSHRMRCHPELMVPDG 706
C C KAF R + H+ THTG KP C C +RF+ + L H R H
Sbjct: 28 CPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH-ARIHTNANSRRN 86
Query: 707 RAAYPAANYNHVPVSNN 757
AA AAN N SN+
Sbjct: 87 AAAAAAAN-NSARSSNS 102
Score = 34.7 bits (76), Expect = 0.016
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 443 YECFICRRVLNSRRTLRKHLLVHEDKCRHVCSY--CNKAFKRRQTLKVHMYTHT 598
Y+C +C + +H+ H + HVC++ C K F R L H HT
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 32.7 bits (71), Expect = 0.066
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +2
Query: 263 DKIKAYVCDLCGYACGTNGELRQHRAIHSDDKPFVC--DKCDKTFKTYSNLKTHMDIHED 436
D + Y C LC A +H H+ +KP VC C K F L H IH +
Sbjct: 21 DAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Query: 437 TS 442
+
Sbjct: 81 AN 82
Score = 29.9 bits (64), Expect = 0.47
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = +2
Query: 20 KCPRITKTLSAMNKHKFKHIPK--ADRKYPCS--SCEKTFKTKETLKSHERSHIPVQERK 187
KCP TK + +H+ +HI ++ + C+ C K F + L H R H R+
Sbjct: 27 KCPLCTKAFYRL-EHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR 85
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 80 PKADRKYPCSSCEKTFKTKETLKSHERSH 166
P A R Y C C K F E H R+H
Sbjct: 20 PDAPRPYKCPLCTKAFYRLEHQTRHIRTH 48
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 41.9 bits (94), Expect = 1e-04
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 440 SYECFICRRVLNSRRTLRKHLLVHEDKCRHVCSY--CNKAFKRRQTLKVHMYTH 595
SYEC C+RV + + +H+ H + CSY C K F RR L H+ TH
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 533 CSYCNKAFKRRQTLKVHMYTHTGVKPLTCKL--CDERFAYASTLRSH-RMRCHPELMVPD 703
C +C + F R++ H+ +HTG KP C C +RF L H R L+ P+
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKALVTPE 65
Score = 31.5 bits (68), Expect = 0.15
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 ESFSCDKCPRITKTLSAMNKHKFKHIPKADRKYPCS--SCEKTFKTKETLKSHERSHI 169
+S+ C C R+ +H H ++ + CS SC+K F ++ L H R+H+
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSH--TGEKPFECSYPSCKKRFTRRDELIRHVRTHL 57
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Frame = +2
Query: 524 RHVCSYCNKAFKRRQTLKVHMYTHTGVKPLTCKL-------CDERFAYASTLRSHRMRCH 682
++VC C +AF R + LK H+ +HT KP TC C +F+ L H+ + H
Sbjct: 69 QYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIH 128
Score = 39.5 bits (88), Expect = 6e-04
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 266 KIKAYVCDLCGYACGTNGELRQHRAIHSDDKPFVCDKCD 382
K+K YVC+ C A L++H H+++KPF C + D
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104
Score = 31.5 bits (68), Expect = 0.15
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 80 PKADRKYPCSSCEKTFKTKETLKSHERSHIPVQERKIFNC 199
P+ ++Y C +C + F E LK H RSH K F C
Sbjct: 64 PQKVKQYVCETCTRAFARLEHLKRHIRSH---TNEKPFTC 100
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 356 KPFVCDKCDKTFKTYSNLKTHMDIHEDTSYECFICRRV 469
K +VC+ C + F +LK H+ H T+ + F C +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSH--TNEKPFTCSEI 103
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +2
Query: 491 RKHLLVHEDKCRHVCSY--CNKAFKRRQTLKVHMYTHTGVKPLTCKLCDERFAYASTLRS 664
+K E R+ C + C K+F R++ + H +HT K C C F + L
Sbjct: 5 KKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNR 64
Query: 665 HRMRCH 682
H + H
Sbjct: 65 HVNQKH 70
Score = 33.1 bits (72), Expect = 0.050
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 65 KFKHIPKADRKYPCS--SCEKTFKTKETLKSHERSHIPVQERKIFNCEVCNMKFT 223
K + + D +Y C C K+F KE + H RSH K F C C+ FT
Sbjct: 6 KSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSH---TNSKAFICPHCSSSFT 57
Score = 31.5 bits (68), Expect = 0.15
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 434 DTSYECFI--CRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHM 586
D Y+C C + + R+H H + +C +C+ +F R L H+
Sbjct: 14 DIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 30.3 bits (65), Expect = 0.35
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 278 YVCDL--CGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMD 424
Y CD C + R+H H++ K F+C C +F L H++
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVN 67
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 263 DKIKAYVCDLCGYACGTNGELRQHRAIHSDDKPFVCDKCDKTFKTYSNLKTHMD-IHEDT 439
D + + CD C + L +H+A HS +P C C+ K LK H+ H D
Sbjct: 26 DSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Query: 440 S 442
S
Sbjct: 86 S 86
Score = 34.3 bits (75), Expect = 0.022
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +2
Query: 35 TKTLSAMNKHKFKHIPKADRKYPCSSCEKTFKTKETLKSHERSHIPVQERKIFNCEV-CN 211
T LSA K + + R +PC C K F E L H+ H + CE+ C
Sbjct: 10 TNVLSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCK 69
Query: 212 MK 217
K
Sbjct: 70 RK 71
Score = 33.9 bits (74), Expect = 0.029
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 8 FSCDKCPRITKTLSAMNKHKFKHIPKADRKYPCSSCEKTFKTKETLKSH-ERSH 166
F CD+C + + +HK H KA+ PC CE K K+ LK H +R H
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACH-SKAE-PIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = +2
Query: 443 YECFICRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHM 586
+ C C + L +H H C YC KR+ LK H+
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHI 78
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 34.3 bits (75), Expect = 0.022
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Frame = +2
Query: 377 CDKTFKTYSNLKTHMDIHEDTSYECFICRRVLNSRRTLRKHLLVHEDK--CR-HVCSYCN 547
C++ T NL H IH T+ R++++ ++ H+ K C C
Sbjct: 31 CEQDLLTLDNLVHH--IHNGTTSNL----RLISNINSILDHIGNRRPKYTCEWDDCPRKG 84
Query: 548 KAFKRRQTLKVHMYTHTGVKPLTCKL--CDERFAYASTLRSHRMRCH 682
R L H+ +HTG KP C + CD F + L H H
Sbjct: 85 MVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 332 HRAIHSDDKPFVCD--KCDKTFKTYSNLKTHM-DIHE 433
H H+ +KPF+C +CD++F L HM +HE
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHE 132
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 33.1 bits (72), Expect = 0.050
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 11/97 (11%)
Frame = +2
Query: 299 YACGTNGELRQHRAIHSDDKP-----FVCDKCDKTFKT----YSNLK--THMDIHEDTSY 445
++CG G LR R I + K F CD C + + Y K H+D HE S
Sbjct: 259 HSCG--GSLRAGRIISASGKKLHPQCFKCDTCSQNLEHVGFYYREGKFYCHLDYHEQFSP 316
Query: 446 ECFICRRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAF 556
C C+ + + + HE+ H C+ C++ F
Sbjct: 317 RCKHCKTPIEDQAVHINNDWFHEN--HHFCAGCSEVF 351
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 29.9 bits (64), Expect = 0.47
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 332 HRAIHSDDKPFVCDKCDKTFKTYSNLKTH 418
H+ ++KP+ C+ C K +K + LK H
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYH 417
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.5 bits (58), Expect = 2.5
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = +2
Query: 359 PFVCDKCDKTFKTYSNLKTHMDIHEDTSYECFICRRVLNSRRTLRKHLLVHEDKCRHVCS 538
P C C +F ++ K HM S+ +I R L + C
Sbjct: 207 PRDCLFCAASFSSFDTCKKHMK----ASHSLYIPEREYLVDEPSLFDYLAEKISIGFTCL 262
Query: 539 YCNKAFKRRQTLKVHMYT--HTGV 604
CN+ FK + ++ HM HT +
Sbjct: 263 TCNREFKSLEAVRAHMQQKGHTSI 286
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 26.6 bits (56), Expect = 4.3
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 326 RQHRAIHSDDKPFVCDKCDKTFKTYS---NLKTHMDIHEDTSYECFICRRVLNSRRTLRK 496
R H + SD FV K KTY+ ++ I E E + RR+L+ ++R
Sbjct: 393 RVHEKLLSDKVDFVTLNLVKESKTYTKKTSVSLQKAIREYVEKEAYYERRLLSIMESIRP 452
Query: 497 HL 502
H+
Sbjct: 453 HI 454
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 5.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -3
Query: 642 ANRSSHSLHVKGLTPVWVYM*TFKVCLRLNALLQYEQTCRHLS 514
ANRSS S H LT + +F LR A +Q +T R +S
Sbjct: 792 ANRSSSSFHNPDLTDTEIQETSFNNDLRPVASIQSAETSRSVS 834
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 26.2 bits (55), Expect = 5.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 407 LKTHMDIHEDTSYECFICRRVLNSRRTL 490
LK ++ +H + EC IC VL+ RTL
Sbjct: 1544 LKKNISMHFEGVEECAICYSVLSVERTL 1571
>SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 26.2 bits (55), Expect = 5.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 83 KADRKYPCSSCEKT 124
K DR+YPCS C+++
Sbjct: 27 KCDRQYPCSRCKES 40
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 269 IKAYVCDLCGYACGTNGELRQHRAIHSDDKPFVCDKCDK 385
+ AY CD CGY E+RQ + + P D+C K
Sbjct: 200 VNAYTCDRCGYE--VFQEIRQKTFLPMSECP--SDECKK 234
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +2
Query: 2 ESFSCDKCPRITKTLSAMNKHKFKHIPKADRKYP---CSSCEKTFKTKETLKSHE 157
E+ S D I L + + + KA R P CS C TF L HE
Sbjct: 140 ENHSSDARDAIKSALRRRMRRREGRVQKALRPTPNLICSKCNTTFNHSTALMMHE 194
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,414,018
Number of Sequences: 5004
Number of extensions: 69797
Number of successful extensions: 326
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -