Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D12
         (804 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   142   5e-36
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    48   8e-08
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    26   0.47 

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  142 bits (343), Expect = 5e-36
 Identities = 78/219 (35%), Positives = 121/219 (55%), Gaps = 1/219 (0%)
 Frame = +3

Query: 147 VPGPFPLPIIGNAHQ-FVVRSTEFLGLLKSFTDKYGDVFRVHFFSYPYVLISHPKYAEAL 323
           +PGP  LP+IGNA   F      F  +LK   + + DV ++       + +  P+  E +
Sbjct: 44  IPGPPALPLIGNALDLFGSPDAMFSQVLKK-AENFKDVVKIWVGPKLVICLIDPRDVEII 102

Query: 324 VSSADLITKGRSYSFLKAWLGEGLLTASGPRWRLHRKFLTPAFHFNILQNFLPVFCKNSE 503
           +SS   I K   Y F K WLG+GLL ++G +WR HRK + P FH N+L++F+ +F  N+ 
Sbjct: 103 LSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTFHLNVLKSFIDLFNANAR 162

Query: 504 ILRDKIRRLADGQPIDLFPITALAALDNVAESIMGVSVNAQQNSESEYVRAIETLSQITT 683
            + +K+R+  +G+  D     +   +D + E+ MGVS   + ++  EY  A+  +  I  
Sbjct: 163 SVVEKMRK-ENGKEFDCHNYMSELTVDILLETAMGVSKPTRDHNAFEYAMAVMKMCDILH 221

Query: 684 LRMQIPLLGEDFIFNLTSYXKKQNIALEVVHGQTKKVIE 800
           LR     L  D++FNLT Y K Q   LE++HG TKKVI+
Sbjct: 222 LRHTKIWLRPDWLFNLTKYGKNQIKLLEIIHGLTKKVIQ 260


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 48.4 bits (110), Expect = 8e-08
 Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 7/176 (3%)
 Frame = +3

Query: 147 VPGPFPLPIIGNAHQFVVRSTEFLGLLKSFTDKYGDVFRVHFFSY--PYVLISHPKYAEA 320
           V GP P+P  G     ++        +K   +KY +   V  ++   P++L++ P+  + 
Sbjct: 34  VVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPFLLLNDPELIKD 93

Query: 321 LV--SSADLITKGRSYSFLKAWLGEGLLTASGPRWRLHRKFLTPAFHFNILQN--FLPVF 488
           ++    +    +G         L   LL     RWR  R  L+P F    L+   +L + 
Sbjct: 94  ILIRDFSKFANRGLGVFERTEPLSPHLLNLEVERWRPLRSRLSPIFTSGKLKEMFYLIIE 153

Query: 489 CK-NSEILRDKIRRLADGQPIDLFPITALAALDNVAESIMGVSVNAQQNSESEYVR 653
           C  N E   DK+  +   +PI+   +TA    D +     G+ +++  N  SE+ R
Sbjct: 154 CSLNLETYLDKL--IEKNEPIECRELTARFTTDVIGSCAFGIDMSSMTNENSEFRR 207


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 141 SNVPGPFPLPIIG 179
           S VPGPF LPI G
Sbjct: 51  SKVPGPFSLPIFG 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,701
Number of Sequences: 438
Number of extensions: 5852
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)