Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D07
         (780 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0608 + 4515709-4515951,4516085-4516678                           39   0.004
08_02_0743 - 20647440-20647927,20647997-20648426,20650127-206505...    36   0.027
03_06_0316 + 33091194-33091370,33091451-33092155                       36   0.027
04_03_0041 + 10046063-10046170,10046284-10046742                       34   0.15 
01_05_0530 + 22984672-22984821,22985444-22985676,22986659-229867...    33   0.34 
10_01_0201 + 2175660-2176892                                           28   9.6  
09_04_0041 - 14051870-14052430,14052509-14052562                       28   9.6  

>07_01_0608 + 4515709-4515951,4516085-4516678
          Length = 278

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 28/67 (41%), Positives = 34/67 (50%)
 Frame = +2

Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
           EM+  AI  LKER+GSS QAI K+I A +      L P  RK L   ++  T      K 
Sbjct: 81  EMIMEAIVALKERTGSSSQAIGKHIHANH---GANLPPNFRKLLSGNLKKLTAAGKLAK- 136

Query: 446 ASGSFKL 466
              SFKL
Sbjct: 137 VKNSFKL 143


>08_02_0743 -
           20647440-20647927,20647997-20648426,20650127-20650570,
           20650639-20650692
          Length = 471

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = +2

Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTK 436
           EM+ +AI  L E+SGS+  AI K+I  +Y       A  +  +L    ESG LI  K
Sbjct: 18  EMILAAIEGLNEKSGSNKSAISKFIEGKYGDLPPAHASLLTAHLARMKESGELIFLK 74


>03_06_0316 + 33091194-33091370,33091451-33092155
          Length = 293

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
 Frame = +2

Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYL----KNAVESGTLIQT 433
           EM++ AIA LKER+GSS  AI K++  ++K   + L    RK L    K  V +G L + 
Sbjct: 59  EMISEAIATLKERTGSSQYAIGKFLEDKHK---DHLPSNFRKQLLVQIKKLVAAGKLTKV 115

Query: 434 K 436
           K
Sbjct: 116 K 116


>04_03_0041 + 10046063-10046170,10046284-10046742
          Length = 188

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +2

Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVD-AEKLAPFIRKYLKNAVESGTLIQTK 436
           EM+  AI  LKER+GSS  AI KY+  ++           +   L+     G L++ K
Sbjct: 36  EMIKEAITVLKERTGSSAHAIAKYMEEKHGASLPANYKKMLSIQLRGFASKGKLVKVK 93


>01_05_0530 +
           22984672-22984821,22985444-22985676,22986659-22986743,
           22986953-22987036,22987114-22987455
          Length = 297

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 21/59 (35%), Positives = 29/59 (49%)
 Frame = +2

Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGK 442
           +++  AI +LKE SGS+   I  YI  QY    E     +   LK  V +G LI+   K
Sbjct: 131 DLILEAIKKLKEPSGSNRTTISSYIEEQY-WPPEDFQRLLSTKLKALVATGKLIKVNQK 188


>10_01_0201 + 2175660-2176892
          Length = 410

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -3

Query: 262 RLRMARFGFRFLSARGSTTTRGCFWFFD 179
           RLR  R G   LS R + T  GCF F D
Sbjct: 124 RLRDVRHGLAVLSTRHAVTDDGCFSFPD 151


>09_04_0041 - 14051870-14052430,14052509-14052562
          Length = 204

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +2

Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYK 355
           EM+ +AI  L +R+GS+  AI ++I  +Y+
Sbjct: 18  EMILAAIEALDDRNGSNKTAISQHIEGKYE 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,778,659
Number of Sequences: 37544
Number of extensions: 239013
Number of successful extensions: 486
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)