Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_D07
(780 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48636| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_47442| Best HMM Match : Linker_histone (HMM E-Value=1.4e-36) 75 5e-14
SB_41055| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_41056| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_5701| Best HMM Match : Linker_histone (HMM E-Value=5.9e-39) 74 1e-13
SB_41057| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38) 73 2e-13
SB_44588| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_17373| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_25960| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_31725| Best HMM Match : Linker_histone (HMM E-Value=1.5e-37) 66 4e-11
SB_25699| Best HMM Match : Linker_histone (HMM E-Value=1.5e-37) 66 4e-11
SB_30056| Best HMM Match : Linker_histone (HMM E-Value=2.4e-37) 66 4e-11
SB_54710| Best HMM Match : Linker_histone (HMM E-Value=6e-38) 64 1e-10
SB_41054| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_25704| Best HMM Match : Linker_histone (HMM E-Value=8.3e-37) 64 1e-10
SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27) 62 5e-10
SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30) 54 1e-07
SB_58714| Best HMM Match : Linker_histone (HMM E-Value=5.7e-15) 50 2e-06
SB_24780| Best HMM Match : Linker_histone (HMM E-Value=0.0023) 34 0.15
SB_1788| Best HMM Match : Linker_histone (HMM E-Value=0.0023) 34 0.15
SB_35969| Best HMM Match : B56 (HMM E-Value=3.1) 33 0.34
SB_37873| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014) 29 5.6
SB_8913| Best HMM Match : Linker_histone (HMM E-Value=0.61) 28 7.4
SB_52757| Best HMM Match : BolA (HMM E-Value=4.8) 28 9.8
SB_41439| Best HMM Match : SWIM (HMM E-Value=0.088) 28 9.8
>SB_48636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 75.8 bits (178), Expect = 4e-14
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
EMV +AI LKER GSS QAI+KYI A YKV +K++ ++ LK E GTL+ TKG G
Sbjct: 20 EMVATAIGALKERGGSSRQAIEKYIKANYKV-GDKVSTQLKMALKRMSEKGTLVHTKGTG 78
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 79 ASGSFKL 85
>SB_47442| Best HMM Match : Linker_histone (HMM E-Value=1.4e-36)
Length = 650
Score = 75.4 bits (177), Expect = 5e-14
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
EM+ +AI+ LK+R+GSS QAI+KYI A YKV E + ++ LK AV G+++QTKG G
Sbjct: 487 EMIAAAISSLKDRNGSSRQAIEKYIKANYKV-GESVGVHLKMALKRAVAGGSILQTKGVG 545
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 546 ASGSFKL 552
>SB_41055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 75.4 bits (177), Expect = 5e-14
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
EMV +AI LKERSGSS QAI+KYI A YKV + + +++ LK E GTL+ TKG G
Sbjct: 57 EMVAAAIDALKERSGSSRQAIEKYIKANYKV-GDNVDTYLKLALKRMSEKGTLVHTKGTG 115
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 116 ASGSFKL 122
>SB_41056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
EMV +AI LKERSGSS QAI+KYI A YKV + + +++ LK + GTL+ TKG G
Sbjct: 57 EMVAAAIDALKERSGSSRQAIEKYIKANYKV-GDNVDTYLKLALKRMSKKGTLVHTKGTG 115
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 116 ASGSFKL 122
>SB_5701| Best HMM Match : Linker_histone (HMM E-Value=5.9e-39)
Length = 370
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/67 (58%), Positives = 48/67 (71%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
EMV +AI LKERSGSS QAI+KYI A YKV + + +++ LK + GTL+ TKG G
Sbjct: 217 EMVAAAIDALKERSGSSRQAIEKYIKANYKV-GDNVDTYLKLALKRMSKKGTLVHTKGTG 275
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 276 ASGSFKL 282
>SB_41057| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
EMV +AI LKERSGSS QAI+KYI A YKV + + +++ LK E GTL+ TKG G
Sbjct: 143 EMVAAAIDALKERSGSSRQAIEKYIKANYKV-GDNVDTYLKLALKRMSEKGTLVHTKGTG 201
Query: 446 ASGSFKL 466
A GSFKL
Sbjct: 202 ACGSFKL 208
>SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38)
Length = 184
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/67 (58%), Positives = 46/67 (68%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
EMV +AI LKER GSS QAI+KYI A YKV +K+ ++ LK E G L+ TKG G
Sbjct: 22 EMVAAAIGALKERGGSSRQAIEKYIKANYKV-GDKVGAQLKMALKRMSEKGALVHTKGTG 80
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 81 ASGSFKL 87
>SB_44588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/67 (58%), Positives = 46/67 (68%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
EMV +AI LKER GSS QAI+KYI A YKV +K+ ++ LK E G L+ TKG G
Sbjct: 22 EMVAAAIGALKERGGSSRQAIEKYIKANYKV-GDKVGTQLKMALKRMSEKGALVHTKGTG 80
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 81 ASGSFKL 87
>SB_17373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 66.9 bits (156), Expect = 2e-11
Identities = 37/67 (55%), Positives = 43/67 (64%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
EMV +AI LKER GSS QAI+KYI A YKV + ++ LK G L+ TKG G
Sbjct: 86 EMVAAAIGALKERGGSSRQAIEKYIKANYKVG--DVGTHLKLALKRMSAKGALVHTKGTG 143
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 144 ASGSFKL 150
>SB_25960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 66.5 bits (155), Expect = 2e-11
Identities = 36/67 (53%), Positives = 44/67 (65%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
EM+ +AI LKER GSS QAI K+I A Y + A ++ LK V +G L+Q KGKG
Sbjct: 50 EMIATAITSLKERGGSSRQAIAKFIKANYPAVGDPGA-HLKMALKRGVAAGRLVQPKGKG 108
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 109 ASGSFKL 115
>SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/67 (53%), Positives = 45/67 (67%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
+M+ +AI LKER+GSS QAI KYI A YKV + ++ LK +G+LI TKG G
Sbjct: 22 DMIKTAIGALKERNGSSRQAIVKYIKANYKVQ-DNADVHVKLALKRMSLAGSLIHTKGVG 80
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 81 ASGSFKL 87
>SB_31725| Best HMM Match : Linker_histone (HMM E-Value=1.5e-37)
Length = 184
Score = 65.7 bits (153), Expect = 4e-11
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
+MV +AI LKER+GSS QAI+KYI YKV + + ++ LK + G L+ TKG G
Sbjct: 24 DMVVAAIGALKERNGSSRQAIEKYIKGNYKV-GDGVGVHLKLALKRMSDKGKLVHTKGVG 82
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 83 ASGSFKL 89
>SB_25699| Best HMM Match : Linker_histone (HMM E-Value=1.5e-37)
Length = 179
Score = 65.7 bits (153), Expect = 4e-11
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
+MV +AI LKER+GSS QAI+KYI YKV + + ++ LK + G L+ TKG G
Sbjct: 24 DMVVAAIGALKERNGSSRQAIEKYIKGNYKV-GDGVGVHLKLALKRMSDKGKLVHTKGVG 82
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 83 ASGSFKL 89
>SB_30056| Best HMM Match : Linker_histone (HMM E-Value=2.4e-37)
Length = 184
Score = 65.7 bits (153), Expect = 4e-11
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
+MV +AI LKER+GSS QAI+KYI YKV + + ++ LK + G L+ TKG G
Sbjct: 24 DMVVAAIGALKERNGSSRQAIEKYIKGNYKV-GDGVGVHLKLALKRMSDKGKLVHTKGVG 82
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 83 ASGSFKL 89
>SB_54710| Best HMM Match : Linker_histone (HMM E-Value=6e-38)
Length = 234
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/67 (52%), Positives = 44/67 (65%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
+MV +AI LKER+GSS QAI+KYI YKV + + ++ LK + G L TKG G
Sbjct: 71 DMVVAAIGALKERNGSSRQAIEKYIKGNYKV-GDNVGVQLKLALKRMSDKGKLAHTKGVG 129
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 130 ASGSFKL 136
>SB_41054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 64.1 bits (149), Expect = 1e-10
Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQ-TKGK 442
EMV +AI LKERSGSS QAI+KYI A YKV + + +++ LK GTL + KG
Sbjct: 19 EMVAAAIDALKERSGSSRQAIEKYIKANYKV-GDNVDTYLKLALKRMSGKGTLSKLEKGT 77
Query: 443 GASGSFKL 466
GASGSFKL
Sbjct: 78 GASGSFKL 85
>SB_25704| Best HMM Match : Linker_histone (HMM E-Value=8.3e-37)
Length = 184
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKG 445
+MV +AI LKER+GSS QAI+KYI +KV + + ++ LK + G L+ TKG G
Sbjct: 24 DMVVAAIGALKERNGSSRQAIEKYIKGNFKV-GDGVGVHLKLALKRMSDKGKLVHTKGVG 82
Query: 446 ASGSFKL 466
ASGSFKL
Sbjct: 83 ASGSFKL 89
>SB_45217| Best HMM Match : Linker_histone (HMM E-Value=4.4e-27)
Length = 228
Score = 62.1 bits (144), Expect = 5e-10
Identities = 35/68 (51%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = +2
Query: 269 MVNSAIAELKERSGSSLQAIKKYIAAQYKV--DAEKLAPFIRKYLKNAVESGTLIQTKGK 442
MV AI L ER GSS Q I KY+ A + V ++EKL ++ LK V+SG L++T G+
Sbjct: 20 MVEEAIKRLHERGGSSRQKIVKYVQANFDVGDNSEKL---VKASLKKGVDSGRLVRTSGQ 76
Query: 443 GASGSFKL 466
GASGSFKL
Sbjct: 77 GASGSFKL 84
>SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30)
Length = 279
Score = 54.0 bits (124), Expect = 1e-07
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +2
Query: 296 KERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGKGASGSFKLE 469
KER+GSS QAI+KYI YKV + + + LK + G L+ TK GASGSFKL+
Sbjct: 129 KERNGSSRQAIEKYIKGNYKV-GDGVGVHLNLALKRMSDKGKLVHTKVVGASGSFKLD 185
>SB_58714| Best HMM Match : Linker_histone (HMM E-Value=5.7e-15)
Length = 169
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLA-PFIRKYLKNA-VESGTLIQTKG 439
+M++SA+ L + G+S QAI KYI ++ + K + + LK A GTL+ KG
Sbjct: 15 DMISSAVKNLGGK-GASRQAINKYIVKEFNLTENKHHHTMLNQALKRASAPEGTLVHNKG 73
Query: 440 KGASGSFKLE 469
KGA+GSFKL+
Sbjct: 74 KGAAGSFKLK 83
>SB_24780| Best HMM Match : Linker_histone (HMM E-Value=0.0023)
Length = 186
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQ 430
EMV AIA L RSGSS + I KY+ V A + ++ + AV++G L++
Sbjct: 30 EMVVKAIAALASRSGSSFKDIFKYLQMNAGVRASS-SLAVKVAISRAVKTGALVK 83
>SB_1788| Best HMM Match : Linker_histone (HMM E-Value=0.0023)
Length = 186
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQ 430
EMV AIA L RSGSS + I KY+ V A + ++ + AV++G L++
Sbjct: 30 EMVVKAIAALASRSGSSFKDIFKYLQMNAGVRASS-SLAVKVAISRAVKTGALVK 83
>SB_35969| Best HMM Match : B56 (HMM E-Value=3.1)
Length = 174
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +2
Query: 395 LKNA-VESGTLIQTKGKGASGSFKL 466
LK A GTL+ KGKGA+GSFKL
Sbjct: 2 LKRASAPEGTLVHNKGKGAAGSFKL 26
>SB_37873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 266 EMVNSAIAELKE-RSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTLIQTKGK 442
E+V A+ EL+E S S Q I + + + + + + + + AVE G +I+T G
Sbjct: 10 ELVYRAVRELQEYHSSVSRQKIVENVQSACR-RGKNVIRLAKLAIIKAVEVGLIIRTSGS 68
Query: 443 GASGSF 460
G +GSF
Sbjct: 69 GLNGSF 74
>SB_54706| Best HMM Match : Linker_histone (HMM E-Value=0.014)
Length = 323
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/23 (52%), Positives = 20/23 (86%)
Frame = +2
Query: 266 EMVNSAIAELKERSGSSLQAIKK 334
+MV +AI LKER+GSSL+++++
Sbjct: 71 DMVVAAIGALKERNGSSLKSLQR 93
>SB_8913| Best HMM Match : Linker_histone (HMM E-Value=0.61)
Length = 297
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +2
Query: 272 VNSAIAELKERSGSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVESGTL 424
V+ AI L G+SLQ I+ YI+A++ L P I+ +++ +E G +
Sbjct: 92 VSEAIRALDRGFGASLQDIEHYISAKHPY-YNNLKPRIKIAVRDDIEHGRI 141
>SB_52757| Best HMM Match : BolA (HMM E-Value=4.8)
Length = 127
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 572 KRKRTKRCPLLPLRNCHRTHHQIRNRVSSK 483
K+K+TK C L +N +R HH RN SK
Sbjct: 88 KKKQTKGCAL---KNYYRCHHHTRNWSPSK 114
>SB_41439| Best HMM Match : SWIM (HMM E-Value=0.088)
Length = 921
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 572 KRKRTKRCPLLPLRNCHRTHHQIRNRVSSK 483
K+K+TK C L +N +R HH RN SK
Sbjct: 178 KKKQTKGCAL---KNYYRCHHNTRNWSPSK 204
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,571,453
Number of Sequences: 59808
Number of extensions: 273742
Number of successful extensions: 610
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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