Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_D06
(397 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 82 4e-15
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 75 4e-13
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 73 3e-12
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 68 8e-11
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 65 4e-10
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 64 9e-10
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 61 9e-09
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 52 5e-06
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 50 2e-05
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 48 5e-05
UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 47 1e-04
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 46 2e-04
UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8; Fungi/M... 45 5e-04
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 42 0.003
UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative; ... 42 0.004
UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1; ... 35 0.50
UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2; ... 34 0.87
UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Re... 32 3.5
UniRef50_P51283 Cluster: Biotin carboxyl carrier protein of acet... 32 3.5
UniRef50_A5GSE8 Cluster: Permease of the major facilitator super... 32 4.6
UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative; ... 32 4.6
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 81.8 bits (193), Expect = 4e-15
Identities = 41/57 (71%), Positives = 44/57 (77%)
Frame = +1
Query: 82 KTF*LRRGGKTPNRSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
K F L+ K K ++ QNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ
Sbjct: 9 KDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 65
Score = 58.8 bits (136), Expect = 4e-08
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKN 140
MPREIKDIKDFL+KARRKDAKSVKIKKN
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKN 28
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 75.4 bits (177), Expect = 4e-13
Identities = 38/56 (67%), Positives = 41/56 (73%)
Frame = +1
Query: 82 KTF*LRRGGKTPNRSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 249
K F L K K ++ NVKFKVRCSR+LYTLVITDKEKAEKLKQSLPPGL
Sbjct: 9 KDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQSLPPGL 64
Score = 51.6 bits (118), Expect = 5e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKN 140
MPR+I++IKDFL+ ARRKDAKSVKIKKN
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKN 28
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 72.5 bits (170), Expect = 3e-12
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 127 K*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 249
K ++ NVKFKVRCS++LYTLVITDKEKAEKLKQSLPPGL
Sbjct: 373 KIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQSLPPGL 413
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 67.7 bits (158), Expect = 8e-11
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +1
Query: 82 KTF*LRRGGKTPNRSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
K F ++ K K ++ N KFKVRC+ +LYTLV+ DK+KAEKLKQSLPPG+Q
Sbjct: 9 KDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQSLPPGIQ 65
Score = 56.4 bits (130), Expect = 2e-07
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKN 140
MP+EIK+IKDFL+KARRKDAKSVKIKKN
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKN 28
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 65.3 bits (152), Expect = 4e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +1
Query: 82 KTF*LRRGGKTPNRSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 249
K F L K K +R+ VKFKVRCSR+LYTL + D+EKA+KLKQSLPPGL
Sbjct: 9 KDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSLPPGL 64
Score = 45.6 bits (103), Expect = 4e-04
Identities = 19/28 (67%), Positives = 26/28 (92%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKN 140
MP++I +IKDFL+ ARRKDA+SVKIK++
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRS 28
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 64.1 bits (149), Expect = 9e-10
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +1
Query: 97 RRGGKTPNRSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
RR + R K R +KFKVRC RFLYTLV+ D +KA+KLKQSLPP L+
Sbjct: 16 RRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQSLPPSLK 67
Score = 39.5 bits (88), Expect = 0.023
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKNPAECQVQ 161
MP E+ DIK F+ RRKDA S +IK+N Q++
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKRNRKTSQIK 35
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 60.9 bits (141), Expect = 9e-09
Identities = 32/50 (64%), Positives = 34/50 (68%)
Frame = +1
Query: 82 KTF*LRRGGKTPNRSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQ 231
K F L K K ++ NVKFKVRCSR LYTLVITDKEKAEKLKQ
Sbjct: 25 KDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLYTLVITDKEKAEKLKQ 74
Score = 50.8 bits (116), Expect = 9e-06
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKN 140
+PREI++IKDFL+ A+RKDAKSVKIKKN
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKN 44
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 51.6 bits (118), Expect = 5e-06
Identities = 20/33 (60%), Positives = 30/33 (90%)
Frame = +1
Query: 154 KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
KFKVRCSR+LYTLV+ DK+KA+K+++S+ P ++
Sbjct: 33 KFKVRCSRYLYTLVVNDKKKADKIERSIHPSVK 65
Score = 42.3 bits (95), Expect = 0.003
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKNPA 146
MPREIK +K+FL RKDA+ VK+K NP+
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNPS 30
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 136 RTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
+ ++ KFKVR SR+ YTLV+ D KA+KL+QSLPP L+
Sbjct: 36 KKIKQTKFKVRGSRYQYTLVVNDAAKAKKLQQSLPPTLE 74
Score = 37.5 bits (83), Expect = 0.093
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKNPA 146
M REIKDIK+F+ ARR D KS +K N A
Sbjct: 1 MAREIKDIKEFVELARRSDIKSAVVKVNKA 30
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 48.4 bits (110), Expect = 5e-05
Identities = 18/32 (56%), Positives = 27/32 (84%)
Frame = +1
Query: 145 QNVKFKVRCSRFLYTLVITDKEKAEKLKQSLP 240
+N KFKVRC+++LYT + DK KAE+LK+++P
Sbjct: 30 ENTKFKVRCAKYLYTYICADKAKAEELKKAIP 61
>UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 78
Score = 47.2 bits (107), Expect = 1e-04
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 136 RTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPP 243
+ + KFK+R SR+LYTL++ D KA+KL QSLPP
Sbjct: 36 KAFRQTKFKLRGSRYLYTLIVNDAGKAKKLLQSLPP 71
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 46.4 bits (105), Expect = 2e-04
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 148 NVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
+ KFK+RC R LYTL + D+ KA+K+ QSLP ++
Sbjct: 44 DTKFKIRCPRMLYTLTVDDRTKADKIVQSLPSSIK 78
>UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8;
Fungi/Metazoa group|Rep: 60S ribosomal protein L38 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 78
Score = 45.2 bits (102), Expect = 5e-04
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1
Query: 136 RTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
+ + KFKVR S LYTLVI D KA+KL QSLPP L+
Sbjct: 36 KPFRQTKFKVRGSSSLYTLVINDAGKAKKLIQSLPPTLK 74
Score = 31.5 bits (68), Expect = 6.1
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKN 140
M REI DIK FL RR D K+ +K N
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKIN 28
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 42.3 bits (95), Expect = 0.003
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 121 RSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
+ K + L + KFKVRCSR+LYT + ++ KA K++ ++P L+
Sbjct: 27 KKKSKGGLLSTKFKVRCSRYLYTFSVPNQVKAAKVEATIPSNLE 70
Score = 37.5 bits (83), Expect = 0.093
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKNPAECQVQGSMLKV 179
MP+E+KD+KD+L +R DAKSV + K ++ + + KV
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLLSTKFKV 41
>UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative;
n=4; Plasmodium|Rep: 60S ribosomal protein L38-1,
putative - Plasmodium vivax
Length = 93
Score = 41.9 bits (94), Expect = 0.004
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 121 RSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
+SK ++ K K+R ++LYT+V DK+KAE+++ SL P L+
Sbjct: 29 KSKTKKNTIITKLKLRTKKYLYTMVFADKKKAERIENSLLPSLK 72
>UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L38e,
putative - Trichomonas vaginalis G3
Length = 98
Score = 35.1 bits (77), Expect = 0.50
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +3
Query: 45 FVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPAE 149
F +MP+++ K+FL A R DAK VK+KK+ E
Sbjct: 21 FFTSMPKQVTTPKEFLALAARSDAKWVKVKKSSDE 55
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 145 QNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
+N KFK+R +++LYTL + K E ++ S+P L+
Sbjct: 55 ENTKFKLRTTKYLYTLTVKPK-FVELVQNSIPESLE 89
>UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 162
Score = 34.3 bits (75), Expect = 0.87
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 140 PCRMSSSRFDAQGSCTPWSSLTKRRLRNLSR 232
P SSR DA +CTP S+T RRLR+ SR
Sbjct: 109 PPTSPSSRSDAPSTCTPLFSMTLRRLRSSSR 139
>UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Rep:
Ribosomal protein - Oryza sativa (Rice)
Length = 79
Score = 32.3 bits (70), Expect = 3.5
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKKNPAECQVQGSMLKVPVHPGHH*QREG 215
MP++I +IK + + +++ QVQG++L+VP+HP +R+G
Sbjct: 1 MPKQIHEIKGLPPDGEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 53
>UniRef50_P51283 Cluster: Biotin carboxyl carrier protein of
acetyl-CoA carboxylase; n=2; Rhodophyta|Rep: Biotin
carboxyl carrier protein of acetyl-CoA carboxylase -
Porphyra purpurea
Length = 157
Score = 32.3 bits (70), Expect = 3.5
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 69 IKDIKDFLIKARRKDAKSVKIKKNPAECQVQGSMLKVP 182
IKD++D L +RK +++K+KKN E + KVP
Sbjct: 5 IKDLQDLLSSVQRKKIQTLKLKKNKFELILNKPSKKVP 42
>UniRef50_A5GSE8 Cluster: Permease of the major facilitator
superfamily; n=1; Synechococcus sp. RCC307|Rep: Permease
of the major facilitator superfamily - Synechococcus sp.
(strain RCC307)
Length = 522
Score = 31.9 bits (69), Expect = 4.6
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -3
Query: 260 SLTWRPGGKLCLSFSAFSLSVMT---RVYRNLEHRTLNLTFC--RVLLYFDRFGVFPPRL 96
++ W +C F FS S++ + + + LTF V+L+F RF PP L
Sbjct: 200 AIDWLTFYLICAGFGIFSCSLVVGNQQEWFQSSFYIILLTFSLIHVILFFIRFASSPPLL 259
Query: 95 N*KVFDIFDF 66
N KVF +F
Sbjct: 260 NPKVFSDINF 269
>UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative;
n=4; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-2, putative - Trichomonas vaginalis G3
Length = 74
Score = 31.9 bits (69), Expect = 4.6
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 57 MPREIKDIKDFLIKARRKDAKSVKIKK 137
MP+++ K+FL A R DAK VK+KK
Sbjct: 1 MPKQVATPKEFLALAARPDAKWVKVKK 27
Score = 31.9 bits (69), Expect = 4.6
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 154 KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
KFK+R ++FLYTLV+ K E ++ S+P L+
Sbjct: 34 KFKLRTTKFLYTLVVKPK-FVELVQNSIPESLE 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,552,393
Number of Sequences: 1657284
Number of extensions: 4164621
Number of successful extensions: 10755
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10753
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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