Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D06
         (397 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528     62   2e-10
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...    62   2e-10
05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471     62   2e-10
07_01_0744 + 5687269-5687365,5687466-5687689,5688307-5688354,568...    27   7.2  
05_05_0125 - 22561972-22562028,22562318-22562416,22562496-225626...    27   7.2  

>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = +1

Query: 82  KTF*LRRGGKTPNRSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 249
           K F L    K     + +RT   VKFKVRCS++LYTL + D +KA KLKQSLPPGL
Sbjct: 9   KDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSLPPGL 64



 Score = 44.0 bits (99), Expect = 4e-05
 Identities = 18/27 (66%), Positives = 25/27 (92%)
 Frame = +3

Query: 57  MPREIKDIKDFLIKARRKDAKSVKIKK 137
           MP++I +IKDFL+ ARRKDA+SV+IK+
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKR 27


>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = +1

Query: 82  KTF*LRRGGKTPNRSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 249
           K F L    K     + +RT   VKFKVRCS++LYTL + D +KA KLKQSLPPGL
Sbjct: 39  KDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSLPPGL 94



 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 17/26 (65%), Positives = 24/26 (92%)
 Frame = +3

Query: 60  PREIKDIKDFLIKARRKDAKSVKIKK 137
           P++I +IKDFL+ ARRKDA+SV+IK+
Sbjct: 32  PKQIHEIKDFLLTARRKDARSVRIKR 57


>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score = 61.7 bits (143), Expect = 2e-10
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = +1

Query: 82  KTF*LRRGGKTPNRSK*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGL 249
           K F L    K     + +R+   VKFKVRCSR+LYTL + D +KA KLKQSLPPGL
Sbjct: 9   KDFLLTARRKDARSVRIKRSKDAVKFKVRCSRYLYTLCVHDTDKANKLKQSLPPGL 64



 Score = 44.4 bits (100), Expect = 3e-05
 Identities = 18/28 (64%), Positives = 26/28 (92%)
 Frame = +3

Query: 57  MPREIKDIKDFLIKARRKDAKSVKIKKN 140
           MP++I +IKDFL+ ARRKDA+SV+IK++
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRS 28


>07_01_0744 +
           5687269-5687365,5687466-5687689,5688307-5688354,
           5689057-5689125
          Length = 145

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +3

Query: 15  DPLHSAG*KLFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPAECQVQ 161
           DP H    K  +  +PRE+ D ++  +K R  D  S+K +  PA+ QV+
Sbjct: 41  DPYHDLDIKEALARLPREVVDARNQRLK-RAMDL-SMKHQYLPADAQVE 87


>05_05_0125 -
           22561972-22562028,22562318-22562416,22562496-22562624,
           22563312-22563355,22563570-22563642,22563791-22563877,
           22563985-22564069,22565460-22565533,22565612-22566192,
           22566275-22568270
          Length = 1074

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 68  NQRYQRLFN*GEEERRQIGQNKEEPCRMSSSRFD 169
           ++ YQ L N   +E   I +NK E CR  SS+++
Sbjct: 302 DEDYQALIN--VDEVHDISENKNEGCRPPSSQYE 333


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,113,959
Number of Sequences: 37544
Number of extensions: 114531
Number of successful extensions: 259
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)