Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D06
         (397 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p pro...    69   2e-12
AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA ...    69   2e-12
AY089463-1|AAL90201.1|  463|Drosophila melanogaster AT27178p pro...    27   6.8  
AE014297-3667|AAF56363.1|  463|Drosophila melanogaster CG10845-P...    27   6.8  

>AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p
           protein.
          Length = 70

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +1

Query: 127 K*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
           K ++   N KFK+RCSRFLYTLV+ DKEKA+K+KQSLPPGLQ
Sbjct: 24  KIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSLPPGLQ 65



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +3

Query: 57  MPREIKDIKDFLIKARRKDAKSVKIKKNP 143
           MPREIK++KDFL KARR DA++VKIKKNP
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNP 29


>AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA
           protein.
          Length = 70

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 30/42 (71%), Positives = 36/42 (85%)
 Frame = +1

Query: 127 K*RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQ 252
           K ++   N KFK+RCSRFLYTLV+ DKEKA+K+KQSLPPGLQ
Sbjct: 24  KIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSLPPGLQ 65



 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +3

Query: 57  MPREIKDIKDFLIKARRKDAKSVKIKKNP 143
           MPREIK++KDFL KARR DA++VKIKKNP
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNP 29


>AY089463-1|AAL90201.1|  463|Drosophila melanogaster AT27178p
           protein.
          Length = 463

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 133 RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSL 237
           RR L+  + K RC R     ++ DKE+ E+  +SL
Sbjct: 268 RRLLRQERAKYRCLRNKALGIVVDKEELERFLESL 302


>AE014297-3667|AAF56363.1|  463|Drosophila melanogaster CG10845-PA
           protein.
          Length = 463

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 133 RRTLQNVKFKVRCSRFLYTLVITDKEKAEKLKQSL 237
           RR L+  + K RC R     ++ DKE+ E+  +SL
Sbjct: 268 RRLLRQERAKYRCLRNKALGIVVDKEELERFLESL 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,942,618
Number of Sequences: 53049
Number of extensions: 195536
Number of successful extensions: 593
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)