Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D05
         (489 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z81128-9|CAC42344.1|  239|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z66515-13|CAA91355.1|  184|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z48638-11|CAA88572.1|  184|Caenorhabditis elegans Hypothetical p...    27   9.7  
U88182-3|ABD63240.1|  136|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z99280-1|CAB16499.1|  225|Caenorhabditis elegans Hypothetical
           protein Y57G11B.5 protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 52  MFKYLIFVALLAFASAKPL 108
           MFK L+F ALLA+A A P+
Sbjct: 1   MFKSLVFSALLAYAVAAPM 19


>Z81128-9|CAC42344.1|  239|Caenorhabditis elegans Hypothetical
           protein T23D8.9b protein.
          Length = 239

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 221 SMQPENMQSTQSTPGVRCTQQRPEQYMQQ 135
           SMQP   Q  Q TP    TQQ+ +   QQ
Sbjct: 57  SMQPPPSQQQQMTPQALSTQQQQQVQQQQ 85


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 221 SMQPENMQSTQSTPGVRCTQQRPEQYMQQ 135
           SMQP   Q  Q TP    TQQ+ +   QQ
Sbjct: 57  SMQPPPSQQQQMTPQALSTQQQQQVQQQQ 85


>Z66515-13|CAA91355.1|  184|Caenorhabditis elegans Hypothetical
           protein R53.8 protein.
          Length = 184

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +1

Query: 22  LSARTKQTI--KMFKYLIFVALLAFASAKPLLVSY 120
           +S+R K++I  KMF  L+ VAL + + A PL V Y
Sbjct: 1   MSSRKKKSIEPKMFIILLSVALCSTSLAAPLNVEY 35


>Z48638-11|CAA88572.1|  184|Caenorhabditis elegans Hypothetical
           protein R53.8 protein.
          Length = 184

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +1

Query: 22  LSARTKQTI--KMFKYLIFVALLAFASAKPLLVSY 120
           +S+R K++I  KMF  L+ VAL + + A PL V Y
Sbjct: 1   MSSRKKKSIEPKMFIILLSVALCSTSLAAPLNVEY 35


>U88182-3|ABD63240.1|  136|Caenorhabditis elegans Hypothetical
           protein C53C11.5 protein.
          Length = 136

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = +1

Query: 10  DDQSLSARTKQTIKMFKYLIFVALL---AFASAKPLLVSYTSPXSCCIYCSGRCCVHR 174
           DD+ +       +K+ K   F+  L    F SA  ++V  T     CI C   CC +R
Sbjct: 43  DDKKMDMYMCSQLKVIKVASFIDNLKSGTFKSAIIVVVVVTISIMLCIACGYYCCCNR 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,723,918
Number of Sequences: 27780
Number of extensions: 74298
Number of successful extensions: 291
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 291
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)