Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_D02
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    25   0.41 
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    25   0.41 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.7  

>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 136 KPRLHIKICRKKCKNKEYYK 195
           +P+LH  +CRK C   +Y+K
Sbjct: 78  EPQLH-NLCRKNCFTTDYFK 96


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 136 KPRLHIKICRKKCKNKEYYK 195
           +P+LH  +CRK C   +Y+K
Sbjct: 78  EPQLH-NLCRKNCFTTDYFK 96


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 407 LVIKITTIYPICIFSCISNV 466
           L+IK   +YP+ +   +SNV
Sbjct: 150 LLIKFVEVYPLFVLLIVSNV 169


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 347 YFSHIYNRKLYPLLFMIL 294
           Y  H Y R+LY +  ++L
Sbjct: 63  YVRHTYYRRLYTITHLVL 80


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 347 YFSHIYNRKLYPLLFMIL 294
           Y  H Y R+LY +  ++L
Sbjct: 63  YVRHTYYRRLYTITHLVL 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,293
Number of Sequences: 336
Number of extensions: 2605
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)