Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_C22
         (517 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VV12 Cluster: CG13066-PA; n=1; Drosophila melanogaste...    38   0.10 
UniRef50_Q9VV08 Cluster: CG13069-PA; n=1; Drosophila melanogaste...    38   0.14 
UniRef50_Q8IQU6 Cluster: CG32213-PA; n=4; Drosophila melanogaste...    36   0.72 
UniRef50_A7NDC7 Cluster: Major facilitator superfamily; n=10; Fr...    33   2.9  
UniRef50_UPI000155F5F1 Cluster: PREDICTED: hypothetical protein;...    33   3.9  
UniRef50_Q7SGA1 Cluster: Putative uncharacterized protein NCU027...    33   3.9  
UniRef50_Q4DN11 Cluster: Putative uncharacterized protein; n=3; ...    33   5.1  
UniRef50_Q45V96 Cluster: Tentative cuticle protein; n=1; Myzus p...    33   5.1  
UniRef50_Q05TJ1 Cluster: Putative uncharacterized protein; n=1; ...    32   6.8  
UniRef50_A4BQN8 Cluster: DNA polymerase III subunit delta; n=3; ...    32   6.8  
UniRef50_A5E499 Cluster: Putative uncharacterized protein; n=1; ...    32   8.9  

>UniRef50_Q9VV12 Cluster: CG13066-PA; n=1; Drosophila
           melanogaster|Rep: CG13066-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 95

 Score = 38.3 bits (85), Expect = 0.10
 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
 Frame = +1

Query: 157 FLITMLALFACAAADPYVVPLPYAATAGY--PLSYVS-SLSVPTVYSSAFTGFY-PQIA- 321
           F + + ALFA AAA+P +  L Y A   Y  PL+Y S   + P  Y++A+T  Y P +A 
Sbjct: 7   FAVVLCALFAAAAANPGL--LAYNAPLAYSTPLAYSSLPAAAPLAYTAAYTPAYAPYVAP 64

Query: 322 YANDY 336
           YA+ Y
Sbjct: 65  YASSY 69


>UniRef50_Q9VV08 Cluster: CG13069-PA; n=1; Drosophila
           melanogaster|Rep: CG13069-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 97

 Score = 37.9 bits (84), Expect = 0.14
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +1

Query: 145 MFKAFLITMLALFACAAADPYVV-PLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYPQIA 321
           MFK F + + AL AC AA P +V PL Y+A    PL  V++     VYS  + G +    
Sbjct: 1   MFKFFAVALFALIACVAAKPGIVAPLAYSA----PL--VAAAPAAAVYSREYHGNFAAPY 54

Query: 322 YANDYI 339
            A+ Y+
Sbjct: 55  VASPYV 60


>UniRef50_Q8IQU6 Cluster: CG32213-PA; n=4; Drosophila
           melanogaster|Rep: CG32213-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 154

 Score = 35.5 bits (78), Expect = 0.72
 Identities = 23/62 (37%), Positives = 33/62 (53%)
 Frame = +1

Query: 145 MFKAFLITMLALFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYSSAFTGFYPQIAY 324
           MFK + + +LAL ACAAA P ++  P A TA  PL+Y +  +V    +   T    Q+  
Sbjct: 26  MFK-YAVVVLALVACAAAKPGLLGAPLAYTA--PLAYSAPAAVVAAPAPVVTATSSQVIA 82

Query: 325 AN 330
            N
Sbjct: 83  RN 84


>UniRef50_A7NDC7 Cluster: Major facilitator superfamily; n=10;
           Francisella tularensis|Rep: Major facilitator
           superfamily - Francisella tularensis subsp. holarctica
           FTA
          Length = 418

 Score = 33.5 bits (73), Expect = 2.9
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = +1

Query: 160 LITMLALFACAAADPYVVPLPYAATAGYPLSYVS--SLSVPTVYSSAFTGFYPQIAYAND 333
           L+  +AL A A    Y+V L Y +     L Y    SL+V TV+S  F+   P     +D
Sbjct: 234 LLLAIALSAYANIMYYLV-LSYLSNHFVELHYSEFFSLAVVTVFSLIFSFSAPLWGLLSD 292

Query: 334 YIFRK*NVKVNTYIWNFFCY 393
           Y+ RK  +K + +I+  F Y
Sbjct: 293 YLGRKPLIKFSIWIYLIFAY 312


>UniRef50_UPI000155F5F1 Cluster: PREDICTED: hypothetical protein;
           n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
           - Equus caballus
          Length = 846

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +2

Query: 77  RTFFMNVSANRVQSNLASDKVSKCLRRF*SQCWLSSPARR--PTRMWCLCRTLQLPATPF 250
           RTF M ++     + +     S C     + C  SSP +R  PT+     R  ++PA   
Sbjct: 718 RTFLMQMATAATPTRMPGPPSSTCSPERGASCQNSSPRKRPSPTKWSGRTRWTRMPAAGS 777

Query: 251 PTFHPYQYLPSTALRSP 301
           P   P     +TA R P
Sbjct: 778 PALPPLPAAETTARRPP 794


>UniRef50_Q7SGA1 Cluster: Putative uncharacterized protein
           NCU02749.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU02749.1 - Neurospora crassa
          Length = 526

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +2

Query: 236 PATPFPTFHPYQYLPSTALRSPASTHKSHTQMIISFVNKMLK*IHTSGTSSVTINKIYCC 415
           P  PFP   P+   PS +   P STH        ++VN  L   +T+G  +V  +K + C
Sbjct: 158 PPRPFPP--PFLSPPSGSFSDPLSTHDRSRDRRAAYVNGKLIRGYTNGDDAVFASKYFVC 215


>UniRef50_Q4DN11 Cluster: Putative uncharacterized protein; n=3;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 1690

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 157 FLITMLALFACAAADPYVVPLPYAATAGYPLSYVSSLSVPTVYS-SAFTGFYPQIA 321
           FL+ + A+         VVPLP A     P   VS   +P + S +AF  FY  +A
Sbjct: 558 FLVDLAAIIGYRETGEMVVPLPSALPPHLPPPEVSEFGMPEIASAAAFASFYRTLA 613


>UniRef50_Q45V96 Cluster: Tentative cuticle protein; n=1; Myzus
           persicae|Rep: Tentative cuticle protein - Myzus persicae
           (Peach-potato aphid)
          Length = 118

 Score = 32.7 bits (71), Expect = 5.1
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 181 FACAAADPYVVPL-PYAATAGYPLSYVSSLSVPTVYSSAFTGFYPQIAYAND 333
           +  A A  Y  P+ PYA +A YP SY    + PT Y++     YP  AYA+D
Sbjct: 44  YIAAPALAYSAPVYPYAYSA-YPYSYSYPAAYPTAYAA-----YPSYAYAHD 89


>UniRef50_Q05TJ1 Cluster: Putative uncharacterized protein; n=1;
           Synechococcus sp. RS9916|Rep: Putative uncharacterized
           protein - Synechococcus sp. RS9916
          Length = 75

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +2

Query: 224 TLQLPATPFPTFHPYQYLPSTALRSPASTHKSHTQMI 334
           TLQ P+TP P   P Q+ PS+A R   +    HT MI
Sbjct: 19  TLQ-PSTPIPAIAPMQWQPSSADRFNGAHQHGHTGMI 54


>UniRef50_A4BQN8 Cluster: DNA polymerase III subunit delta; n=3;
           Ectothiorhodospiraceae|Rep: DNA polymerase III subunit
           delta - Nitrococcus mobilis Nb-231
          Length = 340

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 180 LRLRGGRPVCG-ASAVRCNCRLPPFLRFILISTYRL 284
           LRL GG+P  G A A++  CR PP    +L+++ RL
Sbjct: 83  LRLPGGKPGAGGAQALQAYCRAPPADTLLLVASARL 118


>UniRef50_A5E499 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 157

 Score = 31.9 bits (69), Expect = 8.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 200 TRMWCLCRTLQLPATPFPTFHPYQYLP 280
           T   CL R L L ++P P FHP+  LP
Sbjct: 49  TNRHCLFRALSLSSSPQPPFHPHTLLP 75


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,822,376
Number of Sequences: 1657284
Number of extensions: 8557719
Number of successful extensions: 23713
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23695
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)