Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_C21
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.89 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.89 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.1  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   6.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   6.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.3  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 13/53 (24%), Positives = 31/53 (58%)
 Frame = -2

Query: 474 KSLHLFVVLRNIVRSNRTQESNVII*MEFCHFISCGFVRPINLHFSIESIVEE 316
           K+  LF+V   ++        N+++ +++CH+++   VR   L+  +E++V+E
Sbjct: 173 KTYSLFIVFMTVILPYFI---NLLMELQYCHYLNILRVRYQLLNEYLETLVQE 222


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 13/53 (24%), Positives = 31/53 (58%)
 Frame = -2

Query: 474 KSLHLFVVLRNIVRSNRTQESNVII*MEFCHFISCGFVRPINLHFSIESIVEE 316
           K+  LF+V   ++        N+++ +++CH+++   VR   L+  +E++V+E
Sbjct: 173 KTYSLFIVFMTVILPYFI---NLLMELQYCHYLNILRVRYQLLNEYLETLVQE 222


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 221 LFLLCGCIDIFNYFFNGYYLIKLLQYT 141
           L LL  C+D+FN  F G+ ++ L+  T
Sbjct: 198 LCLLSECVDLFNSLF-GFLVLLLVALT 223


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 400 LNGILSFHQLWLCEAYKSPFFDRV 329
           L+G L + + + C A K+P FD++
Sbjct: 299 LHGQLLWREFFYCAATKNPNFDKM 322


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 7   ADACNXIV-VL*SCILFIFQLFYXSFV 84
           A  C  ++ ++ +C++ IF+L+Y S V
Sbjct: 245 AKYCTTLIGLIKNCVIVIFELYYLSHV 271


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 227 HTLFLLCGCIDIF 189
           HT+FL+C  + +F
Sbjct: 120 HTIFLVCNVLTVF 132


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 40  SCILFIFQLFYXS 78
           +C+ ++F LFY S
Sbjct: 198 NCVTYVFDLFYLS 210


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 492  TIFTYIKSLHLFVVLRNIV 436
            TIFT I +   FV + N++
Sbjct: 1221 TIFTIITATSSFVTIHNVI 1239


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,952
Number of Sequences: 336
Number of extensions: 4070
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)