Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_C21
(778 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0576 - 22443668-22444146,22446239-22446393,22447251-224473... 275 3e-74
02_02_0060 + 6446317-6446871,6447836-6448276,6449035-6449265,644... 264 5e-71
02_02_0058 - 6423776-6423850,6424302-6424379,6426096-6426156,642... 261 5e-70
08_02_0302 + 15546969-15547511,15549514-15549750,15550046-155501... 258 3e-69
01_05_0508 - 22804809-22805231,22805775-22806797 172 3e-43
11_01_0623 - 4998236-4999606 169 3e-42
07_03_1174 + 24538522-24538682,24539229-24539430,24539529-245396... 73 2e-13
06_03_0527 - 21775649-21775743,21775840-21775927,21776150-217762... 61 8e-10
05_05_0003 - 21417119-21417421,21418019-21418599,21418781-21419075 58 8e-09
05_05_0004 - 21422483-21422785,21423354-21423938,21424746-214248... 56 3e-08
03_05_0012 + 19702264-19702459,19702478-19702572 53 2e-07
07_01_0457 - 3468419-3468585,3469674-3469842,3470339-3470384,347... 48 6e-06
12_01_0531 + 4194403-4194417,4194776-4194850,4195136-4195237,419... 44 1e-04
07_03_0786 + 21510477-21511451,21512272-21512499 36 0.027
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 29 5.4
12_01_0535 + 4208410-4208661,4209529-4209627,4210125-4210265,421... 29 5.4
06_03_0375 + 20052687-20053214,20053943-20054110,20054272-200543... 29 5.4
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226... 29 5.4
09_02_0044 - 3471301-3471471,3471804-3472257,3475905-3476341 28 7.2
>06_03_0576 -
22443668-22444146,22446239-22446393,22447251-22447331,
22448475-22448618,22449670-22449695,22449748-22449811,
22449905-22449996,22450550-22450780,22451238-22451678,
22451754-22452293
Length = 750
Score = 275 bits (674), Expect = 3e-74
Identities = 123/189 (65%), Positives = 144/189 (76%)
Frame = +1
Query: 211 SKKRVCXXXXXXXXXXXXXQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 390
+K+RVC QGHPMKPHRIRMTH LL +YGL +M++ +PH A ++ +
Sbjct: 20 AKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVLKPHPARDRDLCR 79
Query: 391 FHSDDYIRFLRSIRPDNVSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 570
FH+DDY+ FLRS+ P+ + + ++RFNVGEDCPVFDGLY FCQ AGGSV AVKLN
Sbjct: 80 FHADDYVAFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGGSVGGAVKLN- 138
Query: 571 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEXA 750
+I INW GGLHHAKK EASGFCYVNDIVL ILELLKYHQRVLY+DID+HHGDGVE A
Sbjct: 139 HGHDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHGDGVEEA 198
Query: 751 FYTTDRVMT 777
FYTTDRVMT
Sbjct: 199 FYTTDRVMT 207
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = +1
Query: 379 EMTKFHSDDYIRFLRSIRPDNVSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV 558
++ SDDY+ L ++ P+ + + RFNV EDCP+F G Y +CQ AG A +
Sbjct: 672 DLRLLRSDDYVASLPAVLPEL---WICSLCRFNVDEDCPIFHGFYIYCQTCAGDCARAII 728
Query: 559 KLNKQASEICIN 594
A + IN
Sbjct: 729 DRYHGAQNVVIN 740
>02_02_0060 +
6446317-6446871,6447836-6448276,6449035-6449265,
6449382-6449473,6449555-6449615,6451541-6451618,
6451853-6452014
Length = 539
Score = 264 bits (647), Expect = 5e-71
Identities = 121/190 (63%), Positives = 142/190 (74%), Gaps = 2/190 (1%)
Frame = +1
Query: 214 KKRVCXXXXXXXXXXXXXQGHPMKPHRIRMTHNLLLNYGLYR--KMEIYRPHKATADEMT 387
K+RVC QGHPMKPHR+RMTH LL +YGL KM++ RP A ++
Sbjct: 23 KRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARDRDLC 82
Query: 388 KFHSDDYIRFLRSIRPDNVSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLN 567
+FHSDDY+ FLR++ P+ + + ++RFNVGEDCPVFDGLY +CQ AG SV AAVKLN
Sbjct: 83 RFHSDDYVAFLRAVTPETQFDQIRSLRRFNVGEDCPVFDGLYAYCQTYAGASVGAAVKLN 142
Query: 568 KQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEX 747
+I INW GGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLYIDID+HHGDGVE
Sbjct: 143 HGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEE 202
Query: 748 AFYTTDRVMT 777
AFYTT+RVMT
Sbjct: 203 AFYTTNRVMT 212
>02_02_0058 -
6423776-6423850,6424302-6424379,6426096-6426156,
6426239-6426330,6426440-6426670,6427510-6427950,
6429037-6429591
Length = 510
Score = 261 bits (639), Expect = 5e-70
Identities = 120/190 (63%), Positives = 140/190 (73%), Gaps = 2/190 (1%)
Frame = +1
Query: 214 KKRVCXXXXXXXXXXXXXQGHPMKPHRIRMTHNLLLNYGLYR--KMEIYRPHKATADEMT 387
K+RVC QGHPMKPHR+RMTH LL +YGL KME+ RP A ++
Sbjct: 23 KRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMEVLRPLPARGIDLC 82
Query: 388 KFHSDDYIRFLRSIRPDNVSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLN 567
+FHSDDY+ FLR++ P+ + ++RFN+G DCPVFDGLY +CQ AG SV AAVKLN
Sbjct: 83 RFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVKLN 142
Query: 568 KQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEX 747
+I INW GGLHHAKKSEASGFCYVNDIVL ILELLK H+RVLYIDID+HHGDGVE
Sbjct: 143 HGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEE 202
Query: 748 AFYTTDRVMT 777
AFYTT+RVMT
Sbjct: 203 AFYTTNRVMT 212
>08_02_0302 +
15546969-15547511,15549514-15549750,15550046-15550188,
15550616-15550706,15550791-15550931
Length = 384
Score = 258 bits (633), Expect = 3e-69
Identities = 113/170 (66%), Positives = 141/170 (82%)
Frame = +1
Query: 268 QGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNVS 447
QGHPMKPHRIRM H+L+++YGL+R +E+ RP+ A+ ++ +FHSDDY+ FL S +
Sbjct: 39 QGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRFHSDDYVAFLASATGNPAL 98
Query: 448 EYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKS 627
+ ++RFNVGEDCPVFDGL+ FCQ SAGGS+ AAVKLN+ ++I +NW GGLHHAKK
Sbjct: 99 LDARAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKG 158
Query: 628 EASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEXAFYTTDRVMT 777
EASGFCYVNDIVL ILELLK+H+RVLY+DIDVHHGDGVE AF+TT+RVMT
Sbjct: 159 EASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMT 208
>01_05_0508 - 22804809-22805231,22805775-22806797
Length = 481
Score = 172 bits (418), Expect = 3e-43
Identities = 89/201 (44%), Positives = 117/201 (58%), Gaps = 13/201 (6%)
Frame = +1
Query: 214 KKRVCXXXXXXXXXXXXXQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKF 393
K+RVC +GH M PHR+ M HNL+ YG+ M R ATA E+ F
Sbjct: 19 KRRVCYYYDPGISTVDYGEGHVMVPHRVTMAHNLVAAYGMLGDMRRLRTAPATAAELADF 78
Query: 394 HSDDYIRFLRSIRPDN------VSEYNKQMQRFNV-------GEDCPVFDGLYEFCQLSA 534
H + Y+ L+ + PD V + + + V G D PVFD L+++C +
Sbjct: 79 HDEGYLALLQDLTPDGCGGDDGVGDMARARGIYAVEGKGGGRGVDNPVFDRLWDYCLRYS 138
Query: 535 GGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYID 714
GGS+AAA L ++I INW GG+HHA + A GFCYVNDIVL I ELL + +RVLY+D
Sbjct: 139 GGSLAAARTLGSGTADIAINWSGGMHHACRGGARGFCYVNDIVLAIRELLAHFRRVLYVD 198
Query: 715 IDVHHGDGVEXAFYTTDRVMT 777
IDVHHGDGV+ AF ++RVMT
Sbjct: 199 IDVHHGDGVQAAFEASNRVMT 219
>11_01_0623 - 4998236-4999606
Length = 456
Score = 169 bits (410), Expect = 3e-42
Identities = 86/194 (44%), Positives = 115/194 (59%), Gaps = 6/194 (3%)
Frame = +1
Query: 214 KKRVCXXXXXXXXXXXXXQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKF 393
K+RVC H M P R+ M H+L+ YG+ M R AT E+ +F
Sbjct: 18 KRRVCYYYDPGIAHIKFSDDHVMVPARVAMAHSLVGVYGMLGDMRRLRTRPATEAEIRRF 77
Query: 394 HSDDYIRFLRSIRPDN----VSEYNKQMQRFNVG--EDCPVFDGLYEFCQLSAGGSVAAA 555
HS +Y+ LR + P++ + K +G +DCP FD L+++C+ AGGS AAA
Sbjct: 78 HSPEYVDLLRDLTPESYFNDAALRQKAEDDHGIGGDDDCPAFDRLWKYCRGYAGGSFAAA 137
Query: 556 VKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGD 735
L AS+I INW GG+HHA +A+GFCYVNDIVL I ELL +RV+Y+DID HHGD
Sbjct: 138 RALVDGASDIAINWSGGMHHASACKATGFCYVNDIVLAINELLGTFRRVIYVDIDAHHGD 197
Query: 736 GVEXAFYTTDRVMT 777
GV+ AF ++RVMT
Sbjct: 198 GVQNAFLDSNRVMT 211
>07_03_1174 +
24538522-24538682,24539229-24539430,24539529-24539675,
24539832-24539944,24540580-24540791,24541194-24541258,
24541581-24541751,24542543-24542887,24542980-24543173,
24543292-24543448,24543946-24544010,24544166-24544331
Length = 665
Score = 73.3 bits (172), Expect = 2e-13
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Frame = +1
Query: 274 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNV-SE 450
HP P R+R L G+ + I + +A + HS ++I+ +RSI S
Sbjct: 32 HPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSR 91
Query: 451 YNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKL--NKQASEICINWGGGLHHAKK 624
NK ++FN G E L+AG + A K+ + +S I + G HHA+
Sbjct: 92 RNKIARKFN---SIYFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPG-HHAEH 147
Query: 625 SEASGFCYVNDIVLGILELLKYH-----QRVLYIDIDVHHGDGVEXAFYTTDRVM 774
+EA GFC N++ + LL +++L +D DVHHG+G + FY+ RV+
Sbjct: 148 NEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGTQKMFYSDPRVL 202
>06_03_0527 -
21775649-21775743,21775840-21775927,21776150-21776236,
21776714-21776764,21776863-21776907,21777260-21777306,
21777380-21777444,21778301-21778467,21778539-21778607,
21778695-21778757,21778882-21778999,21779099-21779154,
21779242-21779349
Length = 352
Score = 61.3 bits (142), Expect = 8e-10
Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Frame = +1
Query: 274 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYIRFLRS-IRPDNVSE 450
HP + L G K + P +AT D++ HS+ Y+ L+S ++ ++ E
Sbjct: 56 HPFDSSKWGRICKFLTKEGHLEKNRVVEPLEATKDDLLVVHSESYLNSLKSSLKVASIVE 115
Query: 451 YNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSE 630
N + LY F + GGS+ +A KL + IN GGG HH +
Sbjct: 116 LPPVAFIPNWLVQQKL---LYPF-RKQVGGSILSA-KLALERGW-AINVGGGFHHCSAEQ 169
Query: 631 ASGFCYVNDIVLGI-LELLKYH-QRVLYIDIDVHHGDGVEXAFYTTDRVMT 777
GFC DI L I ++ + RV+ ID+D H G+G E F RV T
Sbjct: 170 GGGFCAYADISLCIQFAFVRLNISRVMIIDLDAHQGNGHEKDFANDGRVYT 220
>05_05_0003 - 21417119-21417421,21418019-21418599,21418781-21419075
Length = 392
Score = 58.0 bits (134), Expect = 8e-09
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Frame = +1
Query: 274 HPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNVSEY 453
HP R+R ++L + R + + A A E+ FHS +YI L ++ + V
Sbjct: 56 HPENADRVRNMVSILRRGPIARFISWHSGRPAHAAELLSFHSAEYIEEL--VQANAVGAK 113
Query: 454 NKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEIC---INWGGGLHHAKK 624
+ E + G + L+AG +++A + ++I + G HHA+
Sbjct: 114 K-------LCEGTFLNPGSWGAALLAAGTTLSAMKHILDGHAKIAYALVRPPG--HHAQP 164
Query: 625 SEASGFCYVNDIVLGI-LELLKYHQRVLYIDIDVHHGDGVEXAFYTTDRVMT 777
A G+C++N+ L + L L ++V +DIDVH+G+G FY TD V+T
Sbjct: 165 DRADGYCFLNNAGLAVKLALDSGRRKVAVVDIDVHYGNGTAEGFYHTDSVLT 216
>05_05_0004 -
21422483-21422785,21423354-21423938,21424746-21424849,
21425467-21425767
Length = 430
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 610 HHAKKSEASGFCYVNDIVLGI-LELLKYHQRVLYIDIDVHHGDGVEXAFYTTDRVMT 777
HHA+ A G+C++N+ L + L L +RV +DIDVH+G+G FY TD V+T
Sbjct: 198 HHAQPDRADGYCFLNNAGLAVKLALDSGRRRVAVVDIDVHYGNGTAEGFYHTDSVLT 254
>03_05_0012 + 19702264-19702459,19702478-19702572
Length = 96
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +1
Query: 484 EDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEASGFC 645
+DCP FD L+++C+ AA L AS+I INW G +HHA +A+GFC
Sbjct: 49 DDCPAFDRLWKYCR------AYAACVLVDGASDIAINWSGNMHHASACKANGFC 96
>07_01_0457 -
3468419-3468585,3469674-3469842,3470339-3470384,
3470671-3470753,3471395-3471474,3472320-3472428,
3472667-3472735,3472874-3472924,3473059-3473184,
3473312-3473435,3473617-3473672,3473790-3473854,
3474438-3474513,3475050-3475108,3475275-3475365,
3475490-3475990
Length = 623
Score = 48.4 bits (110), Expect = 6e-06
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Frame = +1
Query: 274 HPMKPHRIRMTHNLLLNYGLY-RKMEIYRPHKATADEMTKFHSDDYIRFLRSIRPDNVSE 450
HP +P R+R L G++ K + P + T +E+ + H+ D+I D+V +
Sbjct: 225 HPERPDRLRAIAASLAAAGIFPSKCVMVPPREITKEELLRVHTSDHI--------DSVEQ 276
Query: 451 YNKQMQRFNVGEDCPVFDGLYEFC--QLSAG--GSVAAAVKLNKQASEICINWGGGLHHA 618
+ + + + + C +L+AG +A + + + + G HHA
Sbjct: 277 TKNMLYSYFTSD---TYANGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPG-HHA 332
Query: 619 KKSEASGFCYVNDIVLGILELLKYH-QRVLYIDIDVHHGDGVEXAF 753
+A GFC N+ + L + ++VL +D DVHHG+G + F
Sbjct: 333 GVKQAMGFCLHNNAAVAALAAQRAGAKKVLIVDWDVHHGNGTQEIF 378
>12_01_0531 +
4194403-4194417,4194776-4194850,4195136-4195237,
4195453-4195584,4196137-4196193,4196314-4196565,
4196664-4196845,4197244-4197544
Length = 371
Score = 44.4 bits (100), Expect = 1e-04
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = +1
Query: 511 YEFCQLSAGG------SVAAAVKLN-KQASEICINWGGGLHHAKKSEASGFCYVNDIVLG 669
++ C LSAG SV AA KL K + G HHA GFC +I +
Sbjct: 110 FQECLLSAGAGITLVDSVVAASKLGPKPPLGFALVRPPG-HHAVPEGPMGFCVFGNIAVA 168
Query: 670 ILELLKYH--QRVLYIDIDVHHGDGVEXAFY 756
H +RV+ ID DVHHG+G AFY
Sbjct: 169 ARYAQNQHGLKRVMIIDFDVHHGNGTCDAFY 199
>07_03_0786 + 21510477-21511451,21512272-21512499
Length = 400
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +1
Query: 355 RPHKATADEMTKFHSDDYIRFLRSIRPDNVSEYNKQMQRFNVGEDCPVFDGLYEFC 522
R + A ++ SDD + L ++ P++ + + RFNVGED P+F G Y +C
Sbjct: 348 RCYAARDCDLRLLRSDDCVASLPAVLPES---WICSLCRFNVGEDRPIFYGFYIYC 400
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -1
Query: 736 HHHDAHLCQYIVLFDGISATPICQEQCH*HNRNLTLQTSLHDGGHHPS 593
H H +C+ LF+ I + + + H RNL LQ SL + G +PS
Sbjct: 78 HVHGGIICRVSWLFEFIRSGNVTRSVSKPHGRNLFLQ-SLVEEGQNPS 124
>12_01_0535 +
4208410-4208661,4209529-4209627,4210125-4210265,
4210378-4210560,4210664-4210821,4210905-4211004,
4211085-4211196,4211241-4211419,4211489-4211674,
4211762-4211929
Length = 525
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 361 HKATADEMTKFHSDDYIRFLRSIRPDNVSEYNKQMQ 468
H +T+D+ TK+ D I R+ R D +S Y K +Q
Sbjct: 416 HHSTSDDSTKYRPVDEIEHWRTAR-DPISRYRKWVQ 450
>06_03_0375 +
20052687-20053214,20053943-20054110,20054272-20054354,
20054541-20054610,20054973-20055077
Length = 317
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 604 HHPSLCKFLRPAYSVLQLLQLNPQQITDKIHTGH 503
H+P+ C L P QL L QQ+ K H GH
Sbjct: 19 HYPNFCA-LAPLRPTRQLPSLPQQQLQQKQHVGH 51
>02_05_0902 +
32620668-32621209,32621847-32622258,32622471-32622675,
32622712-32622806,32622945-32623557,32623652-32623820,
32624392-32624749,32625226-32625336,32626207-32626561,
32627262-32627484,32627837-32628058,32628628-32628781
Length = 1152
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Frame = -1
Query: 673 ICQEQCH*HNRNLTLQTSLHDGGHHPSLCKFLRPAYSVLQLLQLNPQQ--------ITDK 518
I + Q HN+ ++L ++H+ P KFL+ A +L L + P+ +T +
Sbjct: 712 IDKNQTSVHNKMVSLLGTMHEFSQRPGTAKFLKNA--ILLFLDVFPRNHILEEAVLVTPQ 769
Query: 517 IHTGHQK 497
IHT +K
Sbjct: 770 IHTAQEK 776
>09_02_0044 - 3471301-3471471,3471804-3472257,3475905-3476341
Length = 353
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 355 RPHKATADEMTKFHSDDYIRFLRSIRPDNVSEYNKQMQRFNVGEDCPVFD 504
R H DEM F ++D ++ + V N QMQ F ++ +F+
Sbjct: 27 RAHNVANDEMQVFATNDQMQVFEANDEMQVFATNDQMQVFEANDEMQLFE 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,276,666
Number of Sequences: 37544
Number of extensions: 392590
Number of successful extensions: 913
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -