BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_C21
(778 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17703-1|CAA76823.1| 111|Anopheles gambiae D7r1 protein protein. 25 2.6
AY045760-1|AAK84942.1| 165|Anopheles gambiae D7-related 1 prote... 25 2.6
AJ133852-1|CAB39727.1| 165|Anopheles gambiae D7-related 1 prote... 25 2.6
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 4.6
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 24 6.0
>Y17703-1|CAA76823.1| 111|Anopheles gambiae D7r1 protein protein.
Length = 111
Score = 25.0 bits (52), Expect = 2.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 394 HSDDYIRFLRSIRPDNVSEYNKQMQRFNVGEDCPVFDGLYEFC 522
H D ++ L +RPD +Y+K ++ N E D E C
Sbjct: 56 HMDCVMKALDFVRPDGTGDYHKLIKPLNAIEKDRKHDFNLEKC 98
>AY045760-1|AAK84942.1| 165|Anopheles gambiae D7-related 1 protein
protein.
Length = 165
Score = 25.0 bits (52), Expect = 2.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 394 HSDDYIRFLRSIRPDNVSEYNKQMQRFNVGEDCPVFDGLYEFC 522
H D ++ L +RPD +Y+K ++ N E D E C
Sbjct: 56 HMDCVMKALDFVRPDGTGDYHKLIKPLNAIEKDRKHDFNLEKC 98
>AJ133852-1|CAB39727.1| 165|Anopheles gambiae D7-related 1 protein
protein.
Length = 165
Score = 25.0 bits (52), Expect = 2.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 394 HSDDYIRFLRSIRPDNVSEYNKQMQRFNVGEDCPVFDGLYEFC 522
H D ++ L +RPD +Y+K ++ N E D E C
Sbjct: 56 HMDCVMKALDFVRPDGTGDYHKLIKPLNAIEKDRKHDFNLEKC 98
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 24.2 bits (50), Expect = 4.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 766 CQWCRKLXQHH 734
CQWCRK+ H
Sbjct: 204 CQWCRKVIPSH 214
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 23.8 bits (49), Expect = 6.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 400 LNGILSFHQLWLCEAYKSPFFDRV 329
L+G L + + + C A K+P FD++
Sbjct: 286 LHGQLLWREFFYCAATKNPTFDKM 309
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,347
Number of Sequences: 2352
Number of extensions: 16367
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -