Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_C20
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0653 - 24747959-24748276,24748847-24748959,24749815-247500... 50 2e-06
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 47 1e-05
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 47 1e-05
09_04_0706 + 19627024-19627380,19629945-19629976,19630657-196307... 45 5e-05
03_05_1146 - 30735010-30735216,30735336-30735650,30740169-307401... 42 3e-04
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 35 0.058
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 34 0.077
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 33 0.24
03_04_0044 + 16754638-16754676,16755472-16755598,16756325-167564... 32 0.41
08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671 30 1.7
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 30 1.7
05_03_0382 + 13342764-13342958,13343178-13343278,13343373-133434... 30 1.7
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 29 2.2
05_06_0133 + 25905455-25905545,25905650-25906202,25906310-259068... 29 2.9
05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948 29 2.9
05_06_0137 + 25936516-25936606,25936716-25937268,25937436-259379... 28 5.1
09_04_0470 + 17875119-17875239,17875327-17875496,17875637-178757... 27 8.9
08_02_1024 - 23723560-23723693,23723835-23724041,23724183-237243... 27 8.9
08_02_0611 + 19317969-19318778 27 8.9
05_06_0135 + 25921970-25922190,25922662-25922692,25924979-25925578 27 8.9
>02_04_0653 -
24747959-24748276,24748847-24748959,24749815-24750015,
24750097-24750267,24750354-24750425,24751515-24751543,
24752161-24752303
Length = 348
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Frame = +3
Query: 153 HEGVSCDSCLKNNFRGRRYKCLIC---IDYDLCATCYES-----GATTNQHTTEHPMQ 302
H GV CDSC RG+RYKC C I +DLC CY + G HT +H M+
Sbjct: 234 HIGVGCDSCGMYPIRGKRYKCKDCTELIGFDLCEECYNTKSKLPGRFNQHHTPDHRME 291
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +3
Query: 168 CDSCLKNNFRGRRYKCLICIDYDLCATCYE---SGATTNQHTTEHPMQCILSRSDFDXYY 338
CD C RR+ C IC D+DLC TCYE + H+ +HPM I D +
Sbjct: 2609 CDGCSTVPILRRRWHCNICPDFDLCETCYEILDADRLPAPHSRDHPMSAIPIELD---TF 2665
Query: 339 GGE 347
GGE
Sbjct: 2666 GGE 2668
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +3
Query: 123 QRRSLAKMNRHEGVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHT 284
+ S+A+ H + CD C G RYK I DYDLC TC+ N++T
Sbjct: 450 KHESMAQHTLHRWIQCDGCGVTPIAGSRYKSNIKDDYDLCNTCFSRMGNVNEYT 503
>09_04_0706 +
19627024-19627380,19629945-19629976,19630657-19630751,
19632116-19632281,19632881-19632938,19633014-19633061,
19633274-19633464,19633580-19633702,19635174-19635289,
19635841-19635924,19636009-19636259,19636438-19636647
Length = 576
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Frame = +3
Query: 144 MNRHEGVSCDSCLKNNFRGRRYKCLIC--IDYDLCATCYESGATT-----NQHTTEHPMQ 302
++ H GV CD C +GRRY C C DLC C+ +G+T +HT +H M+
Sbjct: 495 LHTHVGVGCDGCGVFPIQGRRYSCKECEAPGLDLCEKCFMTGSTAEGRFDQKHTADHDME 554
>03_05_1146 -
30735010-30735216,30735336-30735650,30740169-30740191,
30740591-30740666,30740764-30740889,30740968-30741033,
30741296-30741539,30741639-30741691
Length = 369
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 168 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHP 296
C+ C K+ R KC C D+DLC C+ GA H + HP
Sbjct: 53 CNYCNKDISGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHP 95
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 153 HEGVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHT 284
H + CD C G RYK DYDLC C+ ++T
Sbjct: 425 HRWIQCDGCGVQPIVGPRYKSKTKEDYDLCDACFHRMGNEVEYT 468
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 34.3 bits (75), Expect = 0.077
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 168 CDSCLKNNFRGRRYKCLICIDYDLCATCYESG 263
C+SC + R +RY C D+DLC CY+ G
Sbjct: 277 CNSCSVDCSR-KRYHCRTQADFDLCCDCYDKG 307
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 168 CDSCLKNNFRGRRYKCLICIDYDLCATCYESG 263
C+SC + + +RY C D+DLC+ CY G
Sbjct: 286 CNSCSVDCSK-KRYHCRTQADFDLCSDCYNEG 316
>03_04_0044 +
16754638-16754676,16755472-16755598,16756325-16756451,
16756866-16757431,16757896-16758211,16758373-16758613,
16758734-16758823,16759343-16759780,16759877-16760185,
16760392-16760406
Length = 755
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -2
Query: 257 LVASSAQVVIDANQTFVSSSSKVIFQTRITADSFMAI--HFRQRTSLKKHLL 108
+V SSA +D NQ ++ SK + QT ++ D + I H R S + HL+
Sbjct: 309 VVHSSAASSVDGNQAHMAGLSKKLSQTNVSEDEHVIIPAHLRVPDSERTHLI 360
>08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671
Length = 502
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 168 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQH 281
CD+C K G RY CL C D ++ C + +T H
Sbjct: 294 CDAC-KEPGDGPRYHCLTCEDLNMHKFCAHAPSTLYHH 330
>06_03_1313 - 29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 153 HEGVSCDSCLKNNFRGRRYKCLICIDYDLCATCYES 260
H SC C GRR+ C C + +C CY +
Sbjct: 1265 HLQYSCSHCCTFMVSGRRWVCNECKSFYICDRCYNA 1300
>05_03_0382 +
13342764-13342958,13343178-13343278,13343373-13343459,
13343559-13343709,13343826-13344116,13346058-13346197,
13346276-13346467,13346559-13346631,13346708-13346852,
13347017-13347124,13347213-13347306,13348245-13348324,
13348665-13348738,13349236-13349253
Length = 582
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 234 DLCATCYESGATTNQHTTEHPMQCILSRSDFDXYYGGEALTLEQSQAYTCPFC 392
D A+C++ Q T ++ +C+ +R YG EA + +TCP C
Sbjct: 72 DFAASCHKIKKNNKQCTIQYCRKCLFNR------YGQEAEKVANDGTWTCPKC 118
>02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 153 HEGVSCDSCLKNNFRGRRYKCLICIDYDLCATCYES 260
H SC C G+R+ C C + +C CY++
Sbjct: 1367 HLQYSCSHCCTLMVSGKRWVCHQCRSFYICDKCYDA 1402
>05_06_0133 +
25905455-25905545,25905650-25906202,25906310-25906806,
25906905-25907043,25907182-25907253,25907344-25907415,
25907503-25907583,25907899-25908065,25908148-25908416,
25908512-25908638,25908752-25908820,25908928-25909120,
25909215-25909707
Length = 940
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 373 RTRVLFVTAMGFTDTGLMEHVTAEHADTTLAVVCPVCASMPGGXPNFVT 519
+T++ + GFTD G +++AE+ LA S P G N T
Sbjct: 49 KTKISYAADDGFTDGGACHNISAEYITPGLAKRYHTLRSFPDGKRNCYT 97
>05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948
Length = 508
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 508 NFVTDDXAGHLTLEHRTGSRDLISSXDEPSGI 603
+F DD +GH TL+H+ L + P GI
Sbjct: 372 SFTLDDESGHWTLDHQVALSTLGAKGGSPKGI 403
>05_06_0137 +
25936516-25936606,25936716-25937268,25937436-25937932,
25938030-25938090,25938411-25938482,25938563-25938634,
25938730-25938810,25938918-25939081,25939174-25939442,
25939531-25939657,25939778-25939846,25939944-25940136,
25940232-25940733
Length = 916
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 373 RTRVLFVTAMGFTDTGLMEHVTAEHADTTLAVVCPVCASMPGGXPNFVT 519
+T++ + GFTD G +++AE+ L+ S P G N T
Sbjct: 49 KTKISYAADDGFTDGGSFHNISAEYITPALSARYHNVRSFPDGARNCYT 97
>09_04_0470 +
17875119-17875239,17875327-17875496,17875637-17875784,
17876491-17876697,17877550-17877656
Length = 250
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 222 CIDYDLCATCYESGATTNQHTTEHPMQCILSR 317
C D+ + C+ +GAT H +HP +LS+
Sbjct: 93 CDDFSIGVFCFPAGATLPLH--DHPQMVVLSK 122
>08_02_1024 -
23723560-23723693,23723835-23724041,23724183-23724327,
23724440-23724615,23724713-23724851
Length = 266
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 222 CIDYDLCATCYESGATTNQHTTEHPMQCILSR 317
C D+ + C+ +GAT H +HP +LS+
Sbjct: 101 CADFSMGVFCFPAGATLPLH--DHPEMVVLSK 130
>08_02_0611 + 19317969-19318778
Length = 269
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 168 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQH 281
CD C + G RY+C C ++DL C AT QH
Sbjct: 33 CDGCQEPGGDGPRYRCAPC-NFDLHTDCALPPATL-QH 68
>05_06_0135 + 25921970-25922190,25922662-25922692,25924979-25925578
Length = 283
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 373 RTRVLFVTAMGFTDTGLMEHVTAEHADTTLAVVCPVCASMPGGXPNFVT--DDXAGHLTL 546
+T++ + GFTD G +++AE+ L+ S P G N T AGH L
Sbjct: 117 KTKISYAADDGFTDGGSFHNISAEYFAPALSARYYNVRSFPDGARNCYTLRSLVAGHKYL 176
Query: 547 EHRT 558
T
Sbjct: 177 IRAT 180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,406,767
Number of Sequences: 37544
Number of extensions: 337261
Number of successful extensions: 757
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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