Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_C20
         (612 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    26   0.25 
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              23   1.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.4  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   4.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.2  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.5  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   9.5  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = +3

Query: 294 PMQCILSRSDFDXYYGGEALTL---EQSQA-YTCPFCNR 398
           P +C   R +F  YY  +       EQS   Y C FCNR
Sbjct: 5   PQECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNR 43


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 369 QAYTCPFCNRHGFYRHWSHGACNGGTR 449
           +AYTCP C   G   H +   C  GT+
Sbjct: 71  RAYTCPICGACGDIAH-TVKYCPKGTK 96


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 430 HVTAEHADTTLAVVCPVCASMPGGXPN 510
           H+     DTT  VVC  C+      PN
Sbjct: 342 HMLGGRTDTTYRVVCDACSMGVKYIPN 368


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 220 FASITTCALLATSPAL 267
           F +ITTC ++  +PA+
Sbjct: 56  FGNITTCTVIIKNPAM 71


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 162 VSCDSCLKNNFRGRRYKCLICID 230
           V+  +CL+ +F G   +CL+ ++
Sbjct: 421 VNSVNCLRESFIGTLQRCLLSLE 443


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +3

Query: 162 VSCDSCLKNNFRGRRYKCLICID 230
           V+  +CL+ +F G   +CL+ ++
Sbjct: 459 VNSVNCLRESFIGTLQRCLLSLE 481


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 255 ESGATTNQHTTEHP 296
           ESG TT Q  T HP
Sbjct: 454 ESGTTTLQTRTMHP 467


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 582 GRDEISRPG 556
           GRDE+S+PG
Sbjct: 151 GRDELSQPG 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,622
Number of Sequences: 438
Number of extensions: 3490
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)