Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_C12
         (829 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   6.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.0  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   9.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.0  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 691 CQYCSAERCL 720
           CQYC  ++CL
Sbjct: 138 CQYCRYQKCL 147


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 538 EQRGLLSELLRYSKSES 588
           + R  LSELLRY  S S
Sbjct: 443 QNRAKLSELLRYHTSAS 459


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 668 FFLFFSICVSIAARR 712
           F +FF  CVS+A  R
Sbjct: 4   FVIFFVACVSVALAR 18


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 626 IPNRYRVITMLYEDSDLEYRKSSESKPRCSS 534
           I NR+ ++    E+S  +Y+ +    P C S
Sbjct: 185 IRNRFVILNRYIEESISKYKHAELVMPLCKS 215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,756
Number of Sequences: 336
Number of extensions: 2498
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)