Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_C12
         (829 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000796-1|BAA91380.1|  139|Homo sapiens protein ( Homo sapiens ...    63   1e-09
BC004818-1|AAH04818.1|  139|Homo sapiens chromosome 14 open read...    62   2e-09

>AK000796-1|BAA91380.1|  139|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20789 fis, clone COL01731. ).
          Length = 139

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = +2

Query: 164 SDMSAERVLDAQTWPAEAEAAIGDIXXXXXXXXXXXXXXXXXXI-YINLTTLEDHTYCIE 340
           S+++     D +    EAEA + D+                  + YIN+ T E + YC+E
Sbjct: 20  SELNGFEGTDMKDMRLEAEAVVNDVLSAVNNMFVSKSLRCADDVAYINVETKERNRYCLE 79

Query: 341 MSAAGFRVVGRKYDDVSLTGHVNY-ETPYALLNNISQKYKESFGDELMTKL 490
           ++ AG +VVG  +D V       Y ET Y+LL+ +S  Y+E+FG+ L+ +L
Sbjct: 80  LTEAGLKVVGYAFDQVDDHLQTPYHETVYSLLDTLSPAYREAFGNALLQRL 130


>BC004818-1|AAH04818.1|  139|Homo sapiens chromosome 14 open reading
           frame 129 protein.
          Length = 139

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
 Frame = +2

Query: 164 SDMSAERVLDAQTWPAEAEAAIGDIXXXXXXXXXXXXXXXXXXI-YINLTTLEDHTYCIE 340
           S+++     D +    EAEA + D+                  + YIN+ T E + YC+E
Sbjct: 20  SELNGFEGTDMKDMRLEAEAVVNDVLFAVNNMFVSKSLRCADDVAYINVETKERNRYCLE 79

Query: 341 MSAAGFRVVGRKYDDVSLTGHVNY-ETPYALLNNISQKYKESFGDELMTKL 490
           ++ AG +VVG  +D V       Y ET Y+LL+ +S  Y+E+FG+ L+ +L
Sbjct: 80  LTEAGLKVVGYAFDQVDDHLQTPYHETVYSLLDTLSPAYREAFGNALLQRL 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,898,528
Number of Sequences: 237096
Number of extensions: 1388452
Number of successful extensions: 7501
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7499
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)