Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_C12
         (829 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   3.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   4.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   8.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   8.0  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -3

Query: 665 HCPEQLIVIPFTNIPNRYRVITMLYEDSDLEYRKSSESKPRCSS 534
           H P    V+ +     +  +I+  ++DSD EY  +S+  PR +S
Sbjct: 54  HDPGLAAVLQYLIRSGQLNIISSDHDDSDEEYAANSQ-PPRITS 96


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 662 CPEQLIVIPFTNIPNRYRVITMLYEDSDLE 573
           C E+ I+  F  IPNRYR    +Y+  +++
Sbjct: 770 CEERGIL--FMPIPNRYREAKQIYKVGNVQ 797


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 540 FVPECTHRPSGAPARCNSLVISSSPN 463
           F P   + P    A C+S ++S+SP+
Sbjct: 63  FSPSGPNSPGSFTAGCHSNLLSTSPS 88



 Score = 21.8 bits (44), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 691 CQYCSAERCL 720
           CQYC  ++CL
Sbjct: 162 CQYCRYQKCL 171


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 540 FVPECTHRPSGAPARCNSLVISSSPN 463
           F P   + P    A C+S ++S+SP+
Sbjct: 63  FSPSGPNSPGSFTAGCHSNLLSTSPS 88



 Score = 21.8 bits (44), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 691 CQYCSAERCL 720
           CQYC  ++CL
Sbjct: 162 CQYCRYQKCL 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,368
Number of Sequences: 438
Number of extensions: 2973
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)