Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_C06
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   4.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   5.9  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    20   7.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   7.7  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 227 GVYFGVD*LSTHYNDYTSLGLELS 156
           GVY G    ST  N Y S+G+E S
Sbjct: 8   GVY-GAPYPSTDQNPYPSIGVESS 30


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +3

Query: 183 IIIMCRKLVHSKVNSIFILKKNKVIIF 263
           II++C K+    +   F  +KN  +++
Sbjct: 260 IILLCEKVAKEDIQVRFFEEKNGKVVW 286


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 290 TSRSTYLCNKDDYFIFLQNKNGVYFGV 210
           T R+      D   +F+QN+ G+Y  V
Sbjct: 463 TERTPVPLRFDPGSLFVQNRGGLYLKV 489


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 256 ITLFFFKIKMEFTLEWTNFRHIIM 185
           I  F+F    +FT+ W  F  I++
Sbjct: 39  INSFYFYKTEQFTVLWVLFTMIVL 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,413
Number of Sequences: 336
Number of extensions: 1532
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)