Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_C04
         (820 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   4.9  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   8.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   8.6  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 279  CAKHKIRRPTMTSSELARKCLMQI 350
            C KHK R P +   E +R CL  I
Sbjct: 987  CNKHKTRVPHILPYESSRVCLTPI 1010


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 310 IVGRRILCLAQQIFVALLLRIVNDATDNCAYLLE-SVLSCV 191
           ++G  ++ + QQI   ++ R  +  T  C Y L+  VL+C+
Sbjct: 822 LLGTILIFMDQQITAVIINRKEHKLTKGCGYHLDLFVLACL 862


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 608 ITFLVNKGITQLNEYPEQVELLRKIWFTKYARHWT 712
           IT  V+  + ++ E P  VE  ++ W T  +  WT
Sbjct: 838 ITTGVSSKLARIAERPYSVEAWQREWSTTTSGSWT 872


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 785,507
Number of Sequences: 2352
Number of extensions: 14214
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)