Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_C03
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 172 2e-43
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 143 1e-34
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 131 5e-31
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 130 1e-30
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 104 8e-23
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 97 9e-21
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 97 9e-21
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 97 9e-21
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 91 6e-19
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 85 4e-17
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 79 4e-15
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 79 4e-15
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 79 4e-15
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 79 5e-15
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 79 5e-15
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 75 8e-14
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 75 8e-14
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 74 1e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 74 1e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 74 1e-13
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 72 5e-13
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 72 5e-13
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 70 2e-12
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 67 1e-11
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 67 1e-11
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 61 8e-10
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 61 1e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 61 1e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 59 3e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 59 3e-09
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 58 5e-09
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 55 7e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 52 6e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 52 6e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 52 6e-07
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 52 6e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 40 0.002
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.003
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.099
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.23
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.30
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.40
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.70
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 31 0.92
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 31 0.92
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 1.2
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 1.2
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 30 1.6
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.8
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.7
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.7
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.7
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.9
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 29 4.9
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 8.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 172 bits (419), Expect = 2e-43
Identities = 80/174 (45%), Positives = 120/174 (68%)
Frame = +2
Query: 254 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 433
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 434 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 613
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 614 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDL 775
+RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++ TC+FGGA K QARDL
Sbjct: 196 HRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDL 249
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 143 bits (347), Expect = 1e-34
Identities = 65/170 (38%), Positives = 103/170 (60%)
Frame = +2
Query: 266 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 445
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 446 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 625
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 626 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDL 775
G+GP+A+++ PTRELA Q+ Q A F + C +GG K Q+ +L
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNEL 385
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 131 bits (317), Expect = 5e-31
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 1/175 (0%)
Frame = +2
Query: 254 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 430
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 431 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 610
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 611 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDL 775
P + GDGPIA++LAPTRELA Q + A F ++ C +GG Q DL
Sbjct: 370 PELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADL 424
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 130 bits (313), Expect = 1e-30
Identities = 62/143 (43%), Positives = 90/143 (62%), Gaps = 4/143 (2%)
Frame = +2
Query: 359 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 538
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 539 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 706
GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Query: 707 HTSYVRNTCVFGGAPKRXQARDL 775
++ V GGA + Q L
Sbjct: 403 KLLGIKTVSVIGGASREDQGMKL 425
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 104 bits (249), Expect = 8e-23
Identities = 53/133 (39%), Positives = 86/133 (64%), Gaps = 7/133 (5%)
Frame = +2
Query: 386 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 562
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 563 KTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFGHTSYVR 724
KTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ + + Y +
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-K 192
Query: 725 NTCVFGGAPKRXQ 763
+ C++GG + Q
Sbjct: 193 SVCLYGGGSRPEQ 205
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 97.5 bits (232), Expect = 9e-21
Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 10/141 (7%)
Frame = +2
Query: 353 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 532
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 533 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQI 682
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 238
Query: 683 QQVAADFGHTSYVRNTCVFGG 745
+ A F + S ++ ++GG
Sbjct: 239 HKEATKFSYKSNIQTAILYGG 259
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 97.5 bits (232), Expect = 9e-21
Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 10/141 (7%)
Frame = +2
Query: 353 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 532
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 533 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQI 682
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 222
Query: 683 QQVAADFGHTSYVRNTCVFGG 745
+ A F + S ++ ++GG
Sbjct: 223 HKEATKFSYKSNIQTAILYGG 243
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 97.5 bits (232), Expect = 9e-21
Identities = 58/141 (41%), Positives = 80/141 (56%), Gaps = 10/141 (7%)
Frame = +2
Query: 353 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 532
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 533 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQI 682
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 219
Query: 683 QQVAADFGHTSYVRNTCVFGG 745
+ A F + S ++ ++GG
Sbjct: 220 HKEATKFSYKSNIQTAILYGG 240
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 91.5 bits (217), Expect = 6e-19
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 10/164 (6%)
Frame = +2
Query: 314 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 490
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 491 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 661
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 662 RELAQQIQQVAAD----FGHTSY--VRNTCVFGGAPKRXQARDL 775
RELA+QI + + G +R GG P QA+D+
Sbjct: 276 RELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDV 319
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 85.4 bits (202), Expect = 4e-17
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 11/134 (8%)
Frame = +2
Query: 377 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 556
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 557 SGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVAADF 703
SGKT A+++P + I P R+ P ALVL+PTREL+ QI + F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
Query: 704 GHTSYVRNTCVFGG 745
+ + + + ++GG
Sbjct: 274 AYRTPITSALLYGG 287
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 79.0 bits (186), Expect = 4e-15
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Frame = +2
Query: 407 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 586
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 587 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 79.0 bits (186), Expect = 4e-15
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Frame = +2
Query: 407 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 586
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 587 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 79.0 bits (186), Expect = 4e-15
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Frame = +2
Query: 407 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 586
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 587 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 78.6 bits (185), Expect = 5e-15
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Frame = +2
Query: 407 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 586
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 587 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ + + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 78.6 bits (185), Expect = 5e-15
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Frame = +2
Query: 407 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 586
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 587 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ + + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 74.5 bits (175), Expect = 8e-14
Identities = 38/115 (33%), Positives = 65/115 (56%)
Frame = +2
Query: 401 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 580
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 581 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 74.5 bits (175), Expect = 8e-14
Identities = 38/115 (33%), Positives = 65/115 (56%)
Frame = +2
Query: 401 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 580
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 581 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 598
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 599 INNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 598
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 599 INNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 598
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 599 INNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 71.7 bits (168), Expect = 5e-13
Identities = 41/119 (34%), Positives = 65/119 (54%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 598
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 599 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDL 775
++ P G AL+L PTRELA QI + G ++ + + GG QAR+L
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQAREL 204
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 71.7 bits (168), Expect = 5e-13
Identities = 41/119 (34%), Positives = 65/119 (54%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 598
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 599 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDL 775
++ P G AL+L PTRELA QI + G ++ + + GG QAR+L
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQAREL 204
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/91 (39%), Positives = 53/91 (58%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 598
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 599 INNQPPIRRGDGPIALVLAPTRELAQQIQQV 691
+ +P + LVL PTRELA Q+ QV
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 67.3 bits (157), Expect = 1e-11
Identities = 38/122 (31%), Positives = 67/122 (54%)
Frame = +2
Query: 410 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 589
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 590 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQAR 769
+ I+++ P + ALV+APTRELAQQIQ+V + G V GG R R
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
Query: 770 DL 775
L
Sbjct: 143 KL 144
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 67.3 bits (157), Expect = 1e-11
Identities = 38/122 (31%), Positives = 67/122 (54%)
Frame = +2
Query: 410 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 589
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 590 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQAR 769
+ I+++ P + ALV+APTRELAQQIQ+V + G V GG R R
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
Query: 770 DL 775
L
Sbjct: 143 KL 144
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 66.1 bits (154), Expect = 3e-11
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Frame = +2
Query: 437 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 601
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 602 --NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQAR 769
+ + GP AL++APTREL QI + T+ + T + GG + Q R
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQER 280
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 62.1 bits (144), Expect = 4e-10
Identities = 39/119 (32%), Positives = 58/119 (48%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 598
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 599 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDL 775
+ + P LVL PTRELA QI Q G + + GG QA L
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMAL 159
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 61.3 bits (142), Expect = 8e-10
Identities = 34/114 (29%), Positives = 62/114 (54%)
Frame = +2
Query: 404 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 583
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 584 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 60.9 bits (141), Expect = 1e-09
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +2
Query: 356 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 535
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 536 VGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 700
V A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 701 FGHTSYVRNTCVFGGAPKRXQARDL 775
+ + ++ FGG + + L
Sbjct: 837 LTYETGLKCGLAFGGYSRNANVQHL 861
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 60.9 bits (141), Expect = 1e-09
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +2
Query: 356 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 535
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 536 VGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 700
V A TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 701 FGHTSYVRNTCVFGGAPKRXQARDL 775
+ + ++ FGG + + L
Sbjct: 837 LTYETGLKCGLAFGGYSRNANVQHL 861
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/112 (29%), Positives = 61/112 (54%)
Frame = +2
Query: 410 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 589
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 590 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/99 (33%), Positives = 60/99 (60%)
Frame = +2
Query: 452 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 631
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 632 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 748
G ++++PTREL+ Q V ++ S + V GG+
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGS 178
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/101 (32%), Positives = 56/101 (55%)
Frame = +2
Query: 455 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 634
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 635 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKR 757
A+V+ PTRELA Q Q+ + ++ GG R
Sbjct: 114 --AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLR 152
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 58.4 bits (135), Expect = 5e-09
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +2
Query: 446 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 610
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 611 PPIRRGDGPIALVLAPTRELAQQIQQ 688
R+ DGP+AL+LAPTRELA QI +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHE 477
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/92 (29%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 598
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 599 INNQPPIRRGD-GPIALVLAPTRELAQQIQQV 691
+ + G GP A+++APT+EL QI ++
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 58.0 bits (134), Expect = 7e-09
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Frame = +2
Query: 326 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 505
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 506 WPIAMSGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTREL 670
P +N++ A TGSGKTLA+ LP I+ + + + +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 671 AQQ 679
A Q
Sbjct: 217 AAQ 219
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 56.4 bits (130), Expect = 2e-08
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Frame = +2
Query: 473 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 631
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 632 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQAR 769
GP AL++APTREL QI + T+ + T + GG + Q R
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQER 113
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 54.8 bits (126), Expect = 7e-08
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = +2
Query: 452 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 631
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 632 GPIALVLAPTRELAQQ 679
G AL+++PTRELA Q
Sbjct: 148 GLGALIISPTRELALQ 163
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 51.6 bits (118), Expect = 6e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 410 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 583
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 584 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 706
+ I+ P + LAPT ELA+QI +V G
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 51.6 bits (118), Expect = 6e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 410 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 583
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 584 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 706
+ I+ P + LAPT ELA+QI +V G
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 51.6 bits (118), Expect = 6e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 410 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 583
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 584 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 706
+ I+ P + LAPT ELA+QI +V G
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/119 (24%), Positives = 61/119 (51%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 598
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 599 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDL 775
+++ R +++ PTRE++ QI++ T R + GG+ + DL
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDL 136
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/119 (24%), Positives = 61/119 (51%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 598
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 599 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRXQARDL 775
+++ R +++ PTRE++ QI++ T R + GG+ + DL
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGSAHKLNLIDL 136
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 47.6 bits (108), Expect = 1e-05
Identities = 36/112 (32%), Positives = 54/112 (48%)
Frame = +2
Query: 410 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 589
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 590 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 745
+ I N G AL+L+P+REL QI V F + V GG
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGG 117
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/95 (25%), Positives = 47/95 (49%)
Frame = +2
Query: 452 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 631
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 632 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCV 736
++LAP R +AQ+ + G V TC+
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 419 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 586
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.099
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +2
Query: 509 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 688
P + +++ A TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVD 206
Query: 689 VAADFGHTSYVRNTCVFGGA 748
+ S V GA
Sbjct: 207 EFKRWNDESGVAKVVSLSGA 226
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 515 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 610
A+ GKN V VA TGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.23
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 527 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 682
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 32.7 bits (71), Expect = 0.30
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 470 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 646
G+K PIQ Q + + S +N++ A GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 647 VLAPTRELAQQI 682
+ P ++A ++
Sbjct: 1372 YITPMEDMATKV 1383
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 491 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRG--DGPIALVLAP 658
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 659 TRELAQQI 682
T L Q+
Sbjct: 79 TSALVDQL 86
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 491 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 592
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 31.1 bits (67), Expect = 0.92
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 512 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 691
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 692 AADFGHTSYVRNTCVFGGA 748
A+ + +V +T + G+
Sbjct: 359 ASISSYLDHVYHTQIIQGS 377
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 31.1 bits (67), Expect = 0.92
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 512 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 691
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 692 AADFGHTSYVRNTCVFGGA 748
A+ + +V +T + G+
Sbjct: 359 ASISSYLDHVYHTQIIQGS 377
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 488 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 595
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 488 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 595
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 776 PSPGLAXF*EHHQTHTCYEHKMCVQNLQQLAEFVVL 669
P PGL +HH +HT +H +C+Q + A VL
Sbjct: 19 PKPGLILG-DHHISHTINQHHLCIQKKRLKAGTTVL 53
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 120 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 236
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 551 TGSGKTLAYILPAIVH 598
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 684 SKLLQILDTHLMFVTRVCLVVLLKXSK 764
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 532 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 353
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 352 D 350
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 532 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 353
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 352 D 350
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 175 RRIIAEFVASSKFGTTVSTAIIPV 104
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 175 RRIIAEFVASSKFGTTVSTAIIPV 104
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 470 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 646
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 647 ------VLAPTRELAQQI 682
+APT+ L Q++
Sbjct: 330 EEFKIVYIAPTKSLVQEM 347
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 314 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 472
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 314 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 472
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,451,698
Number of Sequences: 27780
Number of extensions: 384862
Number of successful extensions: 1169
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -