Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_C01
         (659 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0657 + 19271266-19271388,19271906-19271910,19272005-192720...   177   8e-45
03_01_0485 + 3695857-3695951,3696489-3696597,3696746-3696886,369...   130   1e-30
06_03_1274 + 28897491-28897707,28897804-28897935,28898029-288980...    29   4.3  
05_01_0030 + 195663-196691                                             29   4.3  
04_03_1031 + 21850857-21851009,21852229-21852350,21852447-218528...    28   7.6  

>09_04_0657 +
           19271266-19271388,19271906-19271910,19272005-19272067,
           19272150-19272256,19272321-19272418,19273070-19273162,
           19273279-19273320,19273464-19273619
          Length = 228

 Score =  177 bits (430), Expect = 8e-45
 Identities = 85/177 (48%), Positives = 122/177 (68%), Gaps = 4/177 (2%)
 Frame = +1

Query: 136 ALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKIKDA 315
           A I PS+L++D + L  E+ +++  GAD+LH+D+MDG FVPNLT G PV++ LR   K A
Sbjct: 7   AKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTK-A 65

Query: 316 FFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKD-VIEVCRKVREHGMKVGVAIKPGTP 492
           + + H+MV  P  ++ P+A AG + +TFHIE  +D   E+ + ++  GM+ GV+++PGTP
Sbjct: 66  YLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTP 125

Query: 493 VSEVEKYISIS---DMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVHGGV 654
           V EV   +      ++VL+MTVEPGFGGQKFM   M KV+ LR+ YP LDIEV GG+
Sbjct: 126 VEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGL 182


>03_01_0485 +
           3695857-3695951,3696489-3696597,3696746-3696886,
           3696986-3697099,3697558-3697636,3698163-3698272,
           3698344-3698400,3698520-3698609
          Length = 264

 Score =  130 bits (313), Expect = 1e-30
 Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 6/197 (3%)
 Frame = +1

Query: 82  KFFRRKIRSKTKMTRHLKALIGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPN 261
           K FR +  S+         ++ PSIL+A+ S+L E+ + +   G D++H+DVMDG+FVPN
Sbjct: 33  KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 92

Query: 262 LTFGHPVVKCLRGKIKDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVI--EVC 435
           +T G  VV  LR  + D   + H+M+ +PEQ +     AG +  + H E    +      
Sbjct: 93  ITIGPLVVDALR-PVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTV 151

Query: 436 RKVREHGMKVGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLR- 612
            +++  G K GV + P TP++ ++  + + D+VLIM+V PGFGGQ F+E+Q+ K+  LR 
Sbjct: 152 NQIKSLGAKAGVVLNPATPLTAIDYVLDVVDLVLIMSVNPGFGGQSFIESQVKKIAELRR 211

Query: 613 ---ENYPLLDIEVHGGV 654
              E      IEV GGV
Sbjct: 212 LCAEKGVNPWIEVDGGV 228


>06_03_1274 +
           28897491-28897707,28897804-28897935,28898029-28898096,
           28898216-28898280,28898468-28898534,28898630-28898917,
           28898995-28899102,28899236-28899487,28899918-28899997,
           28900092-28900185,28900728-28900810,28901319-28901873,
           28902085-28902616
          Length = 846

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 574 FMENQMAKVQYLRENYPLLDIEVHGG 651
           F++ +M  +QY+ ++Y  L  + HGG
Sbjct: 454 FLDKEMQSIQYIEKDYEGLPFDFHGG 479


>05_01_0030 + 195663-196691
          Length = 342

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = -1

Query: 563 PNPGSTVIIKTMSDIEIYFSTSETGVPGFIATPTFIPCSLTFLHTSITSLTGSI 402
           P P S   +  ++ + I ++     VP F+A  T    SLT L  S  SLTG I
Sbjct: 118 PIPDSLAALTDLTHLTISWTAVSGPVPSFLANLT----SLTMLDLSFNSLTGLI 167


>04_03_1031 + 21850857-21851009,21852229-21852350,21852447-21852891,
            21852981-21853087,21853192-21854524,21854632-21854859,
            21854951-21855181,21855278-21855537,21855651-21856113
          Length = 1113

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 142  IGPSILNADLSQLYEESQKLLDNGAD 219
            I P  L   +S+LY+   KLLDN AD
Sbjct: 972  IAPPELQNTISELYDALVKLLDNNAD 997


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,791,932
Number of Sequences: 37544
Number of extensions: 301204
Number of successful extensions: 669
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)