Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_C01
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC072401-1|AAH72401.1| 228|Homo sapiens ribulose-5-phosphate-3-... 231 2e-60
BC016764-1|AAH16764.1| 228|Homo sapiens ribulose-5-phosphate-3-... 231 2e-60
BC005148-1|AAH05148.2| 228|Homo sapiens ribulose-5-phosphate-3-... 231 2e-60
DQ120706-1|ABC40667.1| 228|Homo sapiens rcRPE protein. 220 4e-57
AJ224326-1|CAA11895.1| 174|Homo sapiens ribulose-5-phosphate-ep... 153 5e-37
AK093658-1|BAC04212.1| 178|Homo sapiens protein ( Homo sapiens ... 127 3e-29
AK056028-1|BAB71076.1| 178|Homo sapiens protein ( Homo sapiens ... 127 3e-29
AC007038-1|AAX93087.1| 178|Homo sapiens unknown protein. 127 3e-29
>BC072401-1|AAH72401.1| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 231 bits (565), Expect = 2e-60
Identities = 107/172 (62%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Frame = +1
Query: 142 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAF 318
IGPSILN+DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D F
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
Query: 319 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 498
F+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPGT V
Sbjct: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVE 126
Query: 499 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVHGGV 654
+ + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEV GGV
Sbjct: 127 YLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV 178
>BC016764-1|AAH16764.1| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 231 bits (565), Expect = 2e-60
Identities = 107/172 (62%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Frame = +1
Query: 142 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAF 318
IGPSILN+DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D F
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
Query: 319 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 498
F+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPGT V
Sbjct: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVE 126
Query: 499 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVHGGV 654
+ + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEV GGV
Sbjct: 127 YLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV 178
>BC005148-1|AAH05148.2| 228|Homo sapiens
ribulose-5-phosphate-3-epimerase protein.
Length = 228
Score = 231 bits (565), Expect = 2e-60
Identities = 107/172 (62%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Frame = +1
Query: 142 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAF 318
IGPSILN+DL+ L E ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D F
Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
Query: 319 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 498
F+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPGT V
Sbjct: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVE 126
Query: 499 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVHGGV 654
+ + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEV GGV
Sbjct: 127 YLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV 178
>DQ120706-1|ABC40667.1| 228|Homo sapiens rcRPE protein.
Length = 228
Score = 220 bits (537), Expect = 4e-57
Identities = 103/172 (59%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
Frame = +1
Query: 142 IGPSILNADLSQLYEESQKLLDNGADYLHLDVMDGQFVPNLTFGHPVVKCLRGKI-KDAF 318
IGPSILN+DL+ L + ++LD+GADYLHLDVMDG FVPN+TFGHPVV+ LR ++ +D F
Sbjct: 7 IGPSILNSDLANLGAKCLQMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66
Query: 319 FETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPGTPVS 498
F+ HMMV KPEQW+ PMA A NQYTFH+E ++ + + +RE+GMKVG+AIKPGT V
Sbjct: 67 FDMHMMVSKPEQWVKPMAVAEANQYTFHLEATENPGTLIKDIRENGMKVGLAIKPGTSVE 126
Query: 499 EVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVHGGV 654
+ + + DM L+MTVEPGFG QKFME+ M KV +LR +P LDIE GGV
Sbjct: 127 YLAPWANQIDMALVMTVEPGFGEQKFMEDMMPKVHWLRTQFPSLDIEGDGGV 178
>AJ224326-1|CAA11895.1| 174|Homo sapiens
ribulose-5-phosphate-epimerase protein.
Length = 174
Score = 153 bits (371), Expect = 5e-37
Identities = 69/116 (59%), Positives = 87/116 (75%)
Frame = +1
Query: 307 KDAFFETHMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMKVGVAIKPG 486
+D FF+ HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMKVG+AIKPG
Sbjct: 9 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPG 68
Query: 487 TPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLDIEVHGGV 654
T V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LDIEV GGV
Sbjct: 69 TSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGV 124
>AK093658-1|BAC04212.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ36339 fis, clone THYMU2006365, highly similar to
Homo sapiens mRNA for putative
ribulose-5-phosphate-epimerase. ).
Length = 178
Score = 127 bits (307), Expect = 3e-29
Identities = 66/127 (51%), Positives = 82/127 (64%), Gaps = 18/127 (14%)
Frame = +1
Query: 328 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK--------------- 462
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMK
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 463 ---VGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD 633
VG+AIKPGT V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LD
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 121
Query: 634 IEVHGGV 654
IEV GGV
Sbjct: 122 IEVDGGV 128
>AK056028-1|BAB71076.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ31466 fis, clone NT2NE2001372, highly similar to
Homo sapiens mRNA for putative
ribulose-5-phosphate-epimerase. ).
Length = 178
Score = 127 bits (307), Expect = 3e-29
Identities = 66/127 (51%), Positives = 82/127 (64%), Gaps = 18/127 (14%)
Frame = +1
Query: 328 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK--------------- 462
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMK
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 463 ---VGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD 633
VG+AIKPGT V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LD
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 121
Query: 634 IEVHGGV 654
IEV GGV
Sbjct: 122 IEVDGGV 128
>AC007038-1|AAX93087.1| 178|Homo sapiens unknown protein.
Length = 178
Score = 127 bits (307), Expect = 3e-29
Identities = 66/127 (51%), Positives = 82/127 (64%), Gaps = 18/127 (14%)
Frame = +1
Query: 328 HMMVEKPEQWITPMADAGVNQYTFHIEPVKDVIEVCRKVREHGMK--------------- 462
HMMV KPEQW+ PMA AG NQYTFH+E ++ + + +RE+GMK
Sbjct: 2 HMMVSKPEQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKSCSVTQAEVQWHSQG 61
Query: 463 ---VGVAIKPGTPVSEVEKYISISDMVLIMTVEPGFGGQKFMENQMAKVQYLRENYPLLD 633
VG+AIKPGT V + + + DM L+MTVEPGFGGQKFME+ M KV +LR +P LD
Sbjct: 62 PLQVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLD 121
Query: 634 IEVHGGV 654
IEV GGV
Sbjct: 122 IEVDGGV 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,253,205
Number of Sequences: 237096
Number of extensions: 1817785
Number of successful extensions: 3193
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3186
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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