Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_B24
         (508 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1751|ABC66176.1|  149|Drosophila melanogaster CG34044-P...    29   3.6  
AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p pro...    28   8.3  
AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA...    28   8.3  

>AE014297-1751|ABC66176.1|  149|Drosophila melanogaster CG34044-PA
           protein.
          Length = 149

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 424 SVQLECPARKLCHILFACCVHCCLLFFIADRLRTNI 317
           S Q  C A +L  +   CC  CC L+ I  +L+TN+
Sbjct: 115 SWQSLCHAFRLAFVCCCCC--CCWLYTICIKLKTNL 148


>AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p
           protein.
          Length = 1394

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 137 CIDPFLKSGIQHPQRDQQ*QENEVG 63
           C+DP LK+  QH Q  Q  Q +E+G
Sbjct: 710 CVDPQLKTACQHLQAIQLHQSSELG 734


>AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA
           protein.
          Length = 1511

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 137 CIDPFLKSGIQHPQRDQQ*QENEVG 63
           C+DP LK+  QH Q  Q  Q +E+G
Sbjct: 827 CVDPQLKTACQHLQAIQLHQSSELG 851


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,293,196
Number of Sequences: 53049
Number of extensions: 362774
Number of successful extensions: 803
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)