Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_B24
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50176-3|CAA90540.1|  196|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z77135-2|CAB00879.1|  769|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z72515-4|CAA96685.1|  288|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>Z50176-3|CAA90540.1|  196|Caenorhabditis elegans Hypothetical
           protein C09G1.3 protein.
          Length = 196

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +3

Query: 330 RRSAMKNNKQQCTQHANKM*HSLRAGHSN*TEALXNVKDISVMSCXIIKW 479
           RR+   N +Q+  +H +     +   +    E+L  V D   MSC +I W
Sbjct: 8   RRTKRNNEEQKTEEHQDVQETRILTYNQKNAESLQQVSDEVFMSCKVIDW 57


>Z77135-2|CAB00879.1|  769|Caenorhabditis elegans Hypothetical
           protein T16A9.4 protein.
          Length = 769

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = -1

Query: 436 FXNASVQLECPARKLCHILFACCVHCC--LLFFIADRLRTNIQCCQPFKLFKCSGLYXTN 263
           F N+SV ++  A+   H    C    C  L  F+A+ L + I  C+ F  F C G Y  N
Sbjct: 67  FENSSVAVDRSAKN--HNDVVCTSRECVRLAGFLAENLNSKINPCEDFYEFAC-GNYGLN 123


>Z72515-4|CAA96685.1|  288|Caenorhabditis elegans Hypothetical
           protein T11A5.5 protein.
          Length = 288

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -2

Query: 189 SFNPPSSYDLLRVGLSCLHRS-IFKKRNTAST 97
           SF+P +  D +R+GLS L+R  +F K    +T
Sbjct: 85  SFHPTNEQDTIRIGLSTLNRDPVFYKFKLENT 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,584,181
Number of Sequences: 27780
Number of extensions: 195231
Number of successful extensions: 528
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)