Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_B23
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    26   0.31 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          26   0.31 
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    24   1.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   5.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.6  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 329 PDKFDVVLLENRRYFXQLFSPKPTKHATPATKEYNSHILL 210
           P +F+V L ENR +  ++  PK   +   A   Y S  L+
Sbjct: 59  PQQFEVSLSENRSHEPEMERPKGASNGKRARTAYTSSQLV 98


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 329 PDKFDVVLLENRRYFXQLFSPKPTKHATPATKEYNSHILL 210
           P +F+V L ENR +  ++  PK   +   A   Y S  L+
Sbjct: 79  PQQFEVSLSENRSHEPEMERPKGASNGKRARTAYTSSQLV 118


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
          protein protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 26 LLSKYIMCIIYADCRY 73
          +  K I+C++YA C Y
Sbjct: 1  MFDKIILCLVYATCVY 16


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 7   FRRRPVAIVQIYYVY 51
           F+R+ + ++Q+YY+Y
Sbjct: 209 FQRKILLMIQLYYLY 223


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 7   FRRRPVAIVQIYYVY 51
           F+R+ + ++Q+YY+Y
Sbjct: 135 FQRKILLMIQLYYLY 149


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 422 LIS*NVLDVVQISIEKLSFAELLGSGLF 339
           LI  ++ D  ++   KLSF  ++G G F
Sbjct: 435 LIKPDIFDQWELGPLKLSFQGVIGEGAF 462


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 214 RMWLLYSFVAGVACFVGF 267
           R + +Y+FVA V C   F
Sbjct: 51  RTYFIYAFVAPVKCLAFF 68


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 214 RMWLLYSFVAGVACFVGF 267
           R + +Y+FVA V C   F
Sbjct: 284 RTYFIYAFVAPVKCLAFF 301


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 214 RMWLLYSFVAGVACFVGF 267
           R + +Y+FVA V C   F
Sbjct: 284 RTYFIYAFVAPVKCLAFF 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,585
Number of Sequences: 336
Number of extensions: 2829
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)