Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_B23
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 0.76
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 29 0.76
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.3
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 28 1.3
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 27 3.1
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 26 4.1
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 26 4.1
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 25 7.1
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3... 25 7.1
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 25 9.4
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 25 9.4
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.7 bits (61), Expect = 0.76
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = -1
Query: 352 DPASSTPTPTSLMLCCLRIGAISXNSLAQSLQNMQPQRRKNTIATFCCSQKLFNSKTS 179
D + P P + C L N L N++ RR N +A + S +F K S
Sbjct: 778 DASYDNPDPQHKVSCTLECSQQQRNKLFAEALNIKTDRRSNDVAQYTKSLLVFYGKHS 835
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 28.7 bits (61), Expect = 0.76
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = -1
Query: 391 RSPSKNFPSLNSLDPASSTPTPTSLMLCC--LRIGAISXNSLAQSLQNMQPQRRKNTIAT 218
+ PS+ P +D +++ T +L+LC L ++ S Q L N+ +KNT+
Sbjct: 732 KPPSQTEPDNKKVDVSTTLSTNDNLVLCWRDLNFTVVTKTSKKQILTNVSGYLKKNTLTA 791
Query: 217 FCCSQK 200
K
Sbjct: 792 LLGENK 797
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = -1
Query: 415 VEMFST*YRSPSKNFPSLNSLDPASSTPTPTSLMLCCLRIGAISXNSLAQSLQNMQ 248
VE T + SL D + TP P+ L L+ GA S +QSL+NM+
Sbjct: 221 VEKLKTSASKQAAEAQSLREFDFFTPTPEPSDKNLEKLKNGASKQASESQSLKNME 276
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 27.9 bits (59), Expect = 1.3
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = +3
Query: 252 MFCRLWAKELXEIAPILKQHNIKLVGVGVEEAGSKEFSEGKFFDGDLYYVENISTYQQLG 431
+F W K E + + + +G G++E +E+ + D ++ENI+
Sbjct: 92 LFDTEWIKNFHEGSHDKAEKRLVSIGKGLKEFLPEEWLLSRL---DCKFLENINVVPNGD 148
Query: 432 FKRFNILTILTSLLWKQSRDAISKGKXXGLS 524
F I+ TSLL++Q + + + + G S
Sbjct: 149 FLNRKIVRTNTSLLYRQKKFNLLREESEGFS 179
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -1
Query: 391 RSPSKNFPSLNSLDPASSTPTPTSLMLCCLRIGAISXNSLAQSLQNMQPQRRKNTI 224
++P K+ SLN + P+SSTPTP S++ S +S+ + +KN +
Sbjct: 606 KTPEKD-RSLN-VTPSSSTPTPASVLAPPSSASLSSSKDANRSVPESPRREKKNRV 659
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 292 RLFSSSTTSNLSGL-ASKRPDPRSSAKESFSMEICTTSRTFQL 417
R FSSS+ ++S L A P P SS K S S TT+ F +
Sbjct: 515 RKFSSSSRVSVSNLLAGSPPSPSSSTK-SASSSYSTTTPAFSI 556
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 102 KSEQKLKMSPDIXQIGTQKVRNVSSGEVLELKSFWEQQNVAIVFFRRW 245
K +Q + ++ Q Q + S G LEL F+E+ ++ +RW
Sbjct: 101 KIKQSYETPDELQQAAKQFYQLASKGIGLELALFYEEYGSLLIRMQRW 148
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 185 NFATGNVSHFLRADLXNIRRHFKFLFAFVIY 93
N TG V+HF+ ++ KF +AF +Y
Sbjct: 219 NVNTGTVTHFVALAPFKNSKNEKFSYAFTLY 249
>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 555
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 410 NVLDVVQISIEK-LSFAELLGSGLFDANPDKFDVVLLE 300
N L V + E L +++ G L+D +KFD+ LLE
Sbjct: 186 NFLASVLLQTEAPLDISDVCGMNLWDIQNEKFDIRLLE 223
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 210 QQNVAIVFFRRWGCMFCRLWAKELXEIAPILKQHNIKLVG 329
++ I F+ W C C+ A E+ + + HN L+G
Sbjct: 39 KKGALIEFYATW-CGHCKSLAPVYEELGALFEDHNDVLIG 77
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 304 SSTTSNLSGLASKRPDPRSSAKESFSMEICTT 399
S T LS ++ P+P S ++SF E+CTT
Sbjct: 469 SERTGLLSHQSTLAPEPLSQQRDSF--ELCTT 498
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,576,613
Number of Sequences: 5004
Number of extensions: 48827
Number of successful extensions: 182
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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