Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_B23
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66515-5|CAA91349.1| 219|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 28 5.0
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 5.0
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 5.0
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 5.0
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 28 5.0
>Z66515-5|CAA91349.1| 219|Caenorhabditis elegans Hypothetical
protein R53.5 protein.
Length = 219
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +3
Query: 147 GTQKVRNVSSGEVLELKSFWEQQNVAIVFFRRWGCMFCRLWAKELXEIAPILKQHNIKLV 326
G ++ V E S +++ + ++ RR GCM CR A EL + P+LK+ I+L
Sbjct: 48 GPKEKEVVERNEQFTADSLFKKGPIMVMAVRRPGCMLCRREAAELHTLLPLLKEKGIELA 107
Query: 327 GVGVEEAGSKEFSEGKFFDGDLY 395
V E G+ EF + F GD+Y
Sbjct: 108 AVVHETRGANEF-KSWFSGGDVY 129
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 3022 VDKLNFAEALGKGLIDSKQNVF 3043
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 2920 VDKLNFAEALGKGLIDSKQNVF 2941
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 2921 VDKLNFAEALGKGLIDSKQNVF 2942
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 3003 VDKLNFAEALGKGLIDSKQNVF 3024
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 3022 VDKLNFAEALGKGLIDSKQNVF 3043
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 2920 VDKLNFAEALGKGLIDSKQNVF 2941
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 2921 VDKLNFAEALGKGLIDSKQNVF 2942
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 3003 VDKLNFAEALGKGLIDSKQNVF 3024
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 159 VRNVSSGEVLELKSFWEQQNVAIVFFRRWGCMFCRLWAKELXEIAP 296
V NV E+L ++NV +VF + C C L+ EL +AP
Sbjct: 64 VVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAP 109
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 159 VRNVSSGEVLELKSFWEQQNVAIVFFRRWGCMFCRLWAKELXEIAP 296
V NV E+L ++NV +VF + C C L+ EL +AP
Sbjct: 790 VVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAP 835
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 383 IEKLSFAELLGSGLFDANPDKF 318
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 159 VRNVSSGEVLELKSFWEQQNVAIVFFRRWGCMFCRLWAKELXEIAP 296
V NV E+L ++NV +VF + C C L+ EL +AP
Sbjct: 790 VVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAP 835
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,235,115
Number of Sequences: 27780
Number of extensions: 270612
Number of successful extensions: 756
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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