Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_B13
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 357 1e-99
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 102 5e-23
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 93 2e-20
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 93 2e-20
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 90 2e-19
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 84 2e-17
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 84 2e-17
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 82 6e-17
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 76 5e-15
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 75 7e-15
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 73 4e-14
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 71 2e-13
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 65 7e-12
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 65 1e-11
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 64 2e-11
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 60 2e-10
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 55 8e-09
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 41 2e-04
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 40 4e-04
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 38 0.001
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 36 0.005
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.037
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 0.60
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 29 0.80
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 28 1.4
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 27 2.4
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 27 3.2
SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces p... 26 4.2
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 26 4.2
SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein L9|Schizosaccha... 26 5.6
SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomy... 26 5.6
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 26 5.6
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 25 7.4
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 7.4
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 25 7.4
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 25 9.8
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 25 9.8
SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 9.8
SPAC22F3.12c |rgs1||regulator of G-protein signaling Rgs1|Schizo... 25 9.8
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 357 bits (877), Expect = 1e-99
Identities = 163/207 (78%), Positives = 179/207 (86%)
Frame = +3
Query: 15 MPTFKCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 194
+PTFK VLVG GGTGKTTFVK HLTGEFEKKY+ATLGVEVHPL FHTN G I FNVWDTA
Sbjct: 7 VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTA 66
Query: 195 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVRVCEGIPIVLCGNKVDIK 374
GQEK GGLRDGYYIQGQC IIMFDVTSR+TYKNVP+W DLVRVCE IPIVLCGNKVD+K
Sbjct: 67 GQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNKVDVK 126
Query: 375 DRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPALLPPEV 554
+RKVKAK I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+G+ NLEFVA PAL PPEV
Sbjct: 127 ERKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPALAPPEV 186
Query: 555 TMDPQWQNQIEKDLQDAQNTALPEEDE 635
+D Q Q ++++ +A LP+ED+
Sbjct: 187 QVDQQLLAQYQQEMNEAAAMPLPDEDD 213
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 102 bits (244), Expect = 5e-23
Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 3/161 (1%)
Frame = +3
Query: 24 FKCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 203
FK +L+G G GK+ + + + Y++T+GV+ F ++ +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68
Query: 204 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVR-VCEGIPIVLCGNKVDIKDR 380
+F + YY II++DVT + ++ NV W ++ R EG+ +L GNK D+ D+
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDK 128
Query: 381 KVKAKTIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 497
KV ++ F N+ + + SAK + N E+ FL ++R++
Sbjct: 129 KVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 93.5 bits (222), Expect = 2e-20
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 4/169 (2%)
Frame = +3
Query: 24 FKCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 203
FK V +G GKT+ + + +F+ Y AT+G++ + +R +WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 204 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVRVCEG--IPIVLCGNKVDIKD 377
+F L Y AII++D+T+ ++ N W D VR G + IVL GNK D+ D
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED-VRAERGDDVIIVLVGNKTDLAD 130
Query: 378 RKVKAKTIVFHRKKNLQ--YYDISAKSNYNFEKPFLWLARKLIGDGNLE 518
++ + + K L+ + + SAK+ +N + F +A+ L G N+E
Sbjct: 131 KRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVE 179
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 93.5 bits (222), Expect = 2e-20
Identities = 50/190 (26%), Positives = 100/190 (52%), Gaps = 9/190 (4%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
K +++G G GKT+ + ++ +F K Y AT+G + + + +WDTAGQE+
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 207 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXD-LVRVC----EGIPIVLCGNKVDI 371
F L +Y C ++++DV + +++ + +W + L++ E P +L GNKVD+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 372 KDRK---VKAKTIVF-HRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPAL 539
+++K K+K + F + + Y++ SAK N ++ F +A+ + + + + +A
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAADFT 189
Query: 540 LPPEVTMDPQ 569
P + M+ Q
Sbjct: 190 DPIHLDMESQ 199
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 90.2 bits (214), Expect = 2e-19
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 6/163 (3%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVE--VHPLVFHTNRGPIRFNVWDTAGQ 200
K VL+G GK++ V + +F+ +T+G L N ++ +WDTAGQ
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS-VKLEIWDTAGQ 74
Query: 201 EKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVRVC-EGIPIVLCGNKVDI-K 374
E++ L YY CAI+++D+T + + +W +L R EGI I L GNK+D+ +
Sbjct: 75 ERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQ 134
Query: 375 DRKV--KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 497
+R+ KA + + NL +++ SAK+ N + F +A+KL
Sbjct: 135 ERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 84.2 bits (199), Expect = 2e-17
Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
K +L+G G GK+ + F ++ T+G++ + I+ +WDTAGQE+
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 207 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVR-VCEGIPIVLCGNKVDIKD-R 380
F + YY ++++DVT + ++ NV W ++ + E + +L GNK D +D R
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 381 KVK-AKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 497
+V + + +++ + SAK+N N ++ F LAR++
Sbjct: 131 QVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 83.8 bits (198), Expect = 2e-17
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Frame = +3
Query: 24 FKCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 203
FK VL+G G GK+ + EF + +T+GVE + I+ +WDTAGQE
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 204 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVRVCE-GIPIVLCGNKVDIKD- 377
++ + YY A+I++D+T + ++ NV W +L + I I+L GNK D+
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHL 130
Query: 378 RKVKAKTI-VFHRKKNLQYYDISAKSNYNFEKPF 476
R V + F + NL + + SA N E+ F
Sbjct: 131 RAVSTEEAQAFAAENNLSFIETSAMDASNVEEAF 164
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 82.2 bits (194), Expect = 6e-17
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 15 MPTFKCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 194
MPT KCV+VG G GKT + + T +F YV T+ + + + P ++DTA
Sbjct: 1 MPTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTA 59
Query: 195 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDI 371
GQE + LR Y Q ++ F VTS +++NV W ++ C G+P ++ G ++D+
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDL 119
Query: 372 KD 377
+D
Sbjct: 120 RD 121
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 75.8 bits (178), Expect = 5e-15
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 11/166 (6%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
K V++G G GKT + + +F ++Y AT+G + + + +WDTAGQE+
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 207 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVRVCE----GIPIVLCGNKVDIK 374
F L +Y C +I+++V + ++ +V NW + + P ++ GN++D K
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID-K 128
Query: 375 DRKVKA----KTIVFHRKK---NLQYYDISAKSNYNFEKPFLWLAR 491
D +A + + + + K N+ +++ SAK N N F ++R
Sbjct: 129 DASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 75.4 bits (177), Expect = 7e-15
Identities = 45/166 (27%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGP----IRFNVWDTA 194
K VL G GTGK+ ++ + +++ + T+G++ + G I+ +WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 195 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVRVCEG-IPIVLCGNKVDI 371
GQEKF + YY A++++DVT++ +++ + +W D+ + I +VL G+K D+
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDL 130
Query: 372 KD-RKVKAKTIV-FHRKKNL-QYYDISAKSNYNFEKPFLWLARKLI 500
++ R+V + F +K++ ++ S+ + N E+ FL + +I
Sbjct: 131 QNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTII 176
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 72.9 bits (171), Expect = 4e-14
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Frame = +3
Query: 24 FKCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 203
+K V+VG GG GK+ + F +Y T+ G + +V DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQE 67
Query: 204 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVRV--CEGIPIVLCGNKVDIKD 377
++ +R+ Y G+ ++++++TSR ++ + ++ ++RV + P+VL NK D++
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 378 RKV--KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 497
+V +A+ + + Y + SAK N E+ F L R +
Sbjct: 128 ERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 70.9 bits (166), Expect = 2e-13
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 203
K V+VG GG GKT + +G F ++YV T+ + + + N I +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 204 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDI-KD 377
++ LR Y ++ F + + NV W+ ++ C PIVL G K D+ KD
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKD 135
Query: 378 R 380
R
Sbjct: 136 R 136
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 65.3 bits (152), Expect = 7e-12
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
K V+VG G GKT + G F + YV T+ E + + I +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHIELALWDTAGQED 66
Query: 207 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDIKD 377
+ LR Y +I F V + + NV W +++ C +PI+L G KVD+++
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRN 124
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 64.9 bits (151), Expect = 1e-11
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
K V+VG G GKT+ + G F +YV T+ E + + ++ +WDTAGQE+
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTV-FENYVSDCRVDGKSVQLALWDTAGQEE 68
Query: 207 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDIKDRK 383
+ LR Y + ++ F + S + +NV W ++ +C +P +L G K D++
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDP 128
Query: 384 V 386
V
Sbjct: 129 V 129
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 64.1 bits (149), Expect = 2e-11
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQE 203
K V++G G GKT+ + G F + Y T+ +H + N I ++WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNS--IELSLWDTAGQE 72
Query: 204 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDIK-- 374
++ LR Y +I F V SR + +NV W ++ C G+ +VL K D++
Sbjct: 73 EYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRGA 132
Query: 375 -DRKVKAKTIVFH-------RKKN-LQYYDISAKSNYNFEKPFLWLAR 491
+ +V I+ + +K N ++Y + SAK N + F AR
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 60.5 bits (140), Expect = 2e-10
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
K V+VG G GKT + G F + YV T+ E + + + +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWDTAGQED 66
Query: 207 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDIKD 377
+ LR Y +I F V S + NV W +++ C +PI+L K D+++
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRN 124
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 55.2 bits (127), Expect = 8e-09
Identities = 28/116 (24%), Positives = 50/116 (43%)
Frame = +3
Query: 21 TFKCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQ 200
T K ++G GKT+ + ++ G F+++ TLGV I F++WD GQ
Sbjct: 10 TIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 201 EKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVRVCEGIPIVLCGNKVD 368
+F + + MFD++ + T ++ W+ + +L G K D
Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYD 125
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 40.7 bits (91), Expect = 2e-04
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 8/165 (4%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
+ +L+G GKTT +K L E + T G ++ L +RF +WD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKC-LLNEDVNEVSPTFGFQIRTLEVEG----LRFTIWDIGGQKT 72
Query: 207 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVRVCEGI---PIVLCGNKVDI-- 371
Y+ + I + D + + N +L+ V E + I++ NK D+
Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL-VEEKLLFTSILVLANKSDVSG 131
Query: 372 ---KDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 497
+ K I ++ + + + +SA + N + WLA L
Sbjct: 132 ALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL 176
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 39.5 bits (88), Expect = 4e-04
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
+ ++G+ GK++ ++ F + Y T+ + + + + DTAGQ++
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQ-EFATEIIDTAGQDE 66
Query: 207 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVR--VCEGIPIVLCGNKVDI-KD 377
+ L + I ++++ +TS+ +++ V ++ E +PIV+ GNK D+
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 378 RKVKAKT-IVFHRKKNLQYYDISAKSNYNFEKPF 476
R V A+ + + + SA+ N N + F
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAF 160
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 38.3 bits (85), Expect = 0.001
Identities = 28/100 (28%), Positives = 43/100 (43%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
+ ++VG GKTT + GE + T+G V + + I F VWD GQ+K
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYRN----ISFTVWDVGGQDK 73
Query: 207 FGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHXDLVRV 326
L Y+ Q I + D R + + H +L R+
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDR---ERISEAHEELQRM 110
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 35.9 bits (79), Expect = 0.005
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTN-RGPIRFNVWDTAGQE 203
K +L+G G+GK++ ++ + + K LG + H G + N+WD GQE
Sbjct: 4 KVLLMGRSGSGKSS-MRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQE 62
Query: 204 KF-----GGLRDGYYIQGQCAIIMFDVTSR 278
F RD + Q I +FDV SR
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESR 92
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.1 bits (72), Expect = 0.037
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
+ +++G GKTT + L + T+G V + + I+FNVWD GQ+K
Sbjct: 23 RILMLGLDAAGKTTIL-YKLKLNQSVVTIPTVGFNVETVTYKN----IKFNVWDVGGQDK 77
Query: 207 FGGLRDGYYIQGQCAIIMFD 266
L Y+ + I + D
Sbjct: 78 IRPLWRHYFTGTKGLIFVVD 97
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 29.1 bits (62), Expect = 0.60
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 33 VLVGAGGTGKTTFVK---XHLTGEFEKKYVATLGVEVHPLVFHTN 158
++VG G+GKTTF++ HL + + Y+ L V L + N
Sbjct: 12 IVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEAN 56
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 28.7 bits (61), Expect = 0.80
Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVKXHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 206
K + +G GKTT + H+ + +A + +HP G +RF +D G ++
Sbjct: 22 KMLFLGLDNAGKTTLL--HM---LKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQ 76
Query: 207 FGGLRDGYYIQGQCAIIMFDVT--SRVTYKNVPNWHXDLVRVCEGIPIVLCGNKVD 368
L Y+ + + + D R++ + +P ++ GNK+D
Sbjct: 77 ARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKID 132
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 272 GYVEHDDSTLSLNIVSVSKTTKLLLSGCVPHIKTNWPA-VRMEY*RMYFDTQS 117
G ++ D T + I+S + T + GC P+ KTNW +Y R+ D +S
Sbjct: 393 GEPQNVDETRASEILSQDELTVDVDLGCGPYAKTNWTCDFSYDYVRINADYRS 445
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 522 VAMPALLPPEVTMDPQWQNQIEKDLQDAQNTALPEEDE 635
+++P PP D + +E+D++D AL EDE
Sbjct: 29 LSLPPSSPPPEFSDEAAEALVEEDIEDLDGEALDVEDE 66
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 33 VLVGAGGTGKTTFVK 77
VL+G GTGKTTF K
Sbjct: 379 VLLGENGTGKTTFCK 393
>SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 552 VTMDPQWQNQIEKDLQDAQNTALPEED 632
VT + N+I K ++D +NT LP+ D
Sbjct: 112 VTEINEISNKIPKSIEDLENTLLPQAD 138
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 300 NWHXDLVRVC-EGIPIVLCGNKVDIKDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPF 476
+WH + +V +G V G D+ ++ +K +KK L +I AK E+
Sbjct: 977 HWHVEAGKVTGKGKTAVDDGKFEDLSEKDLKKIEAKATKKKKLTRNEIKAKERRAREREL 1036
Query: 477 LWL 485
WL
Sbjct: 1037 AWL 1039
>SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein
L9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +3
Query: 354 GNKVDIKDRKVKAKTIVFHRKKNLQYYDISAKSNYNFEKPFLW 482
G VDIK R V K+NL++ DI K N K +W
Sbjct: 16 GVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNTIKFIVW 58
>SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 256
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -3
Query: 379 LSLISTLFPHKTIGIPSHTRTKSXCQLGTFLYVTREVT 266
L+ + P T+ P H TKS + + ++ T E+T
Sbjct: 161 LNHVLAALPDDTVTYPGHEYTKSNAKFSSTIFSTPELT 198
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 332 FTYTDQIXMPVRYIF-VRNSRGYVEHDDSTLSLNIVSVSKTTKLLLSGCV 186
+ YTD + +F V + +EH+ + L ++ SK +L+ CV
Sbjct: 177 YFYTDASPLKTPLVFPVPENNKEIEHEVVSEILELIEKSKNPSILVDACV 226
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 222 DGYYIQGQCAIIMFDVTSRVTYKNVP 299
D Y G+C+ M +++ V YKN P
Sbjct: 53 DSRYADGRCSAAMRSLSNYVLYKNNP 78
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +3
Query: 420 NLQYYDISAKSNYNFEKPFLWL 485
N+ Y +I++K NY+ + + WL
Sbjct: 244 NMPYIEITSKHNYDIDFKYKWL 265
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 27 KCVLVGAGGTGKTTFVK 77
K +L+GAG +GKTT +K
Sbjct: 76 KVLLLGAGDSGKTTIMK 92
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 33 VLVGAGGTGKTTF 71
+L GA GTGKTTF
Sbjct: 34 MLCGASGTGKTTF 46
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 362 FVSAQDNRDTFTYTDQIXMPVRY 294
FVS + +DTF Y D + P +
Sbjct: 526 FVSPRSIKDTFAYADSVLYPSNF 548
>SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3
Query: 418 FFLWKTIVFALTFLSLISTLFPHKTIGIPS 329
F LW V+ ++ +SL ++ FPH + + S
Sbjct: 11 FNLWSHGVYKISSISLSNSFFPHSFMFVKS 40
>SPAC22F3.12c |rgs1||regulator of G-protein signaling
Rgs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = -1
Query: 174 NELARGSYG--ILEDVLRHPESQRIFSRTLQSN 82
NE+ +GS ILE +LR P Q F L+ N
Sbjct: 333 NEVEKGSTNKEILETILRKPNLQTYFFEFLKKN 365
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,871,781
Number of Sequences: 5004
Number of extensions: 60464
Number of successful extensions: 249
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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