Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_B09
         (827 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical pr...    49   5e-06
U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical pr...    47   2e-05
AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical...    44   1e-04
AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical ...    33   0.19 
AF068714-9|AAC17810.1|   87|Caenorhabditis elegans Hypothetical ...    33   0.19 
AC084153-15|AAK84589.2|  152|Caenorhabditis elegans Hypothetical...    33   0.25 
AL032626-7|CAA21544.1|   79|Caenorhabditis elegans Hypothetical ...    33   0.33 
AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical ...    31   0.76 
Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    29   5.4  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    29   5.4  
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr...    29   5.4  
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical pr...    28   7.1  

>Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical
           protein F36G3.3 protein.
          Length = 141

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 21/70 (30%), Positives = 31/70 (44%)
 Frame = +2

Query: 251 QMGPKPARYTCPSCKASITTRVEYVSATKTHXXXXXXXXXXXXXXXXIPYCGKSCRNATH 430
           ++ P   +  CP C+  I TR + V    T                 +P+C +SC++  H
Sbjct: 67  RLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRSCKDIIH 126

Query: 431 YCPNCSAYIG 460
            CPNC A IG
Sbjct: 127 TCPNCRAMIG 136


>U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical
           protein F16F9.1 protein.
          Length = 157

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = +2

Query: 218 PTQQFITVQAPQMGPKPARY--TCPSCKASITTRVEYVSATKTHXXXXXXXXXXXXXXXX 391
           P    + V  P+  P  A Y  TC SC   + T  ++V  + T                 
Sbjct: 70  PNPTVVIVTTPKPAPSFASYETTCYSCGKYVHTLPKFVIGSLT-WIVFILVLICFFPLAF 128

Query: 392 IPYCGKSCRNATHYCPNCSAYIG 460
           +P+C  SC++A HYCP C+A +G
Sbjct: 129 VPFCLDSCKDAHHYCPRCNALLG 151


>AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical
           protein Y87G2A.19 protein.
          Length = 110

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +2

Query: 254 MGPKPARYTCPSCKASITTRVEYVSATKTHXXXXXXXXXXXXXXXX----IPYCGKSCRN 421
           +  +P    CP CK    T + +V+   T+                    +P+C ++ ++
Sbjct: 29  LSDRPQLLDCPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKD 88

Query: 422 ATHYCPNCSAYIGSY 466
           A HYCP+C A+IG+Y
Sbjct: 89  AEHYCPSCRAWIGTY 103


>AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical
           protein Y56A3A.6 protein.
          Length = 798

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
 Frame = +2

Query: 155 QNPPP----YNNQMQTDLYHVVPTVPTQQFITVQAPQMGPKPARYTCPSCKASIT--TRV 316
           +NPPP    Y  + QT +   +P+VPT  ++ +Q    G KPA  T    K S T  T  
Sbjct: 429 KNPPPKLSDYRKEQQTVVAPRMPSVPTNGYVRLQ--MNGKKPAPVTPHPVKLSPTPYTGP 486

Query: 317 EYVSATK 337
           EY S+ K
Sbjct: 487 EYSSSPK 493


>AF068714-9|AAC17810.1|   87|Caenorhabditis elegans Hypothetical
           protein B0348.1 protein.
          Length = 87

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
 Frame = +2

Query: 233 ITVQAPQMGPKPARYT--CPSCKASITTRVEYVSATKTHXXXXXXXXXXXXXXXXIPYCG 406
           ITV  P+M      Y+  CP C+ + TTR+E  S                        C 
Sbjct: 5   ITVYGPKMTEHYEPYSEYCPKCQCNHTTRME--SRRGNCWWIAFFIGFFLFFPICYWLCC 62

Query: 407 KSCRNATHYCPNCSAYIGSYIG 472
           +S ++  HYCP+C   + +  G
Sbjct: 63  QSSKDTLHYCPSCGTLLATRQG 84


>AC084153-15|AAK84589.2|  152|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.15 protein.
          Length = 152

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 24/89 (26%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
 Frame = +2

Query: 200 HVVPTVPTQQFITVQAPQMG---PKPARYTCPSCKASITTRVEYVSATKTHXXXXXXXXX 370
           HVV   PTQ  + + A        KP    CP C+ S+TTR  +   T            
Sbjct: 59  HVVQQ-PTQATVIISASVKHVDQDKPYLEYCPRCQTSVTTRTVHSIGTCWWIILFIGVFV 117

Query: 371 XXXXXXXIPYCGKSCRNATHYCPNCSAYI 457
                     C  S ++  H+CPNC   +
Sbjct: 118 FCWPILYCLCCAGS-KDVKHFCPNCGTML 145


>AL032626-7|CAA21544.1|   79|Caenorhabditis elegans Hypothetical
           protein Y37D8A.8 protein.
          Length = 79

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 17/61 (27%), Positives = 24/61 (39%)
 Frame = +2

Query: 263 KPARYTCPSCKASITTRVEYVSATKTHXXXXXXXXXXXXXXXXIPYCGKSCRNATHYCPN 442
           KP +  CP C+ ++ T VEY                       +  C    R+A H+CPN
Sbjct: 11  KPYQEYCPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFFLIYIL--CCIDIRDAIHHCPN 68

Query: 443 C 445
           C
Sbjct: 69  C 69


>AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical
           protein Y37D8A.6 protein.
          Length = 132

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 2/100 (2%)
 Frame = +2

Query: 164 PPYNNQMQTDLYHVVPTVPTQQFITVQAPQMGPKPARYT--CPSCKASITTRVEYVSATK 337
           PP     Q      V  V   Q I +   +M P    YT  CP C  ++ TRVE      
Sbjct: 30  PPTQMPQQGPGQGPVYVVQQPQEIIIVGTKMAPSFEPYTEFCPRCNTNVCTRVERTMGFC 89

Query: 338 THXXXXXXXXXXXXXXXXIPYCGKSCRNATHYCPNCSAYI 457
           +                   +C    +++ H CPNC   +
Sbjct: 90  SWTMLFLGLFVFFPLLCC--FCLDGFKDSRHSCPNCGTIL 127


>Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical
           protein F35E2.5 protein.
          Length = 575

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 24/78 (30%), Positives = 30/78 (38%)
 Frame = +2

Query: 104 LVQHQADLSGVDIAETTQNPPPYNNQMQTDLYHVVPTVPTQQFITVQAPQMGPKPARYTC 283
           LV    DL GV    T   PP      +T    +  T  T +  T   P + P+P   T 
Sbjct: 267 LVNEICDLIGVCAKNTVTKPPRRTTTTRTTTKRLTTTKATLKTTTKTLPVIPPRP-NVTK 325

Query: 284 PSCKASITTRVEYVSATK 337
           P  + S T R    S TK
Sbjct: 326 PITR-STTKRTTTRSTTK 342


>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = +2

Query: 152 TQNPPPYNNQMQTDLYHVVPTVPTQQFITVQAPQMGPKPARYTCPSCKASITTRVEYVSA 331
           T NP P  N +Q  L H V   P  +  T   P   P  A  +      ++T     +SA
Sbjct: 103 TPNPTPTQNPVQLPLPHAVSEKPGDKKSTGPTPSPVPSKAPISAAKLPGTVTKVAPLLSA 162

Query: 332 TK 337
            +
Sbjct: 163 AQ 164


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = +2

Query: 152 TQNPPPYNNQMQTDLYHVVPTVPTQQFITVQAPQMGPKPARYTCPSCKASITTRVEYVSA 331
           T NP P  N +Q  L H V   P  +  T   P   P  A  +      ++T     +SA
Sbjct: 103 TPNPTPTQNPVQLPLPHAVSEKPGDKKSTGPTPSPVPSKAPISAAKLPGTVTKVAPLLSA 162

Query: 332 TK 337
            +
Sbjct: 163 AQ 164


>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
           protein T13H2.5b protein.
          Length = 1092

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 176 NQMQTDLYHVVPTVPTQQFITVQAPQMGP 262
           +Q    +   VP  PTQQF T Q P  GP
Sbjct: 330 SQKMASIRIAVPQKPTQQFATPQQPVRGP 358


>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
            T13H2.5a protein.
          Length = 2471

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 176  NQMQTDLYHVVPTVPTQQFITVQAPQMGP 262
            +Q    +   VP  PTQQF T Q P  GP
Sbjct: 1709 SQKMASIRIAVPQKPTQQFATPQQPVRGP 1737


>Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical
           protein K04D7.3 protein.
          Length = 483

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 475 LTDVAPDIRAAVRTVVCGVSAAFAAVRNA 389
           LT +AP    AV+T++CG SA   A++ A
Sbjct: 131 LTSIAPKGLKAVQTMLCGTSANENAIKTA 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,585,415
Number of Sequences: 27780
Number of extensions: 355401
Number of successful extensions: 926
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)