Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_B04
(738 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3) 32 0.42
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 31 0.74
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 31 0.97
SB_56444| Best HMM Match : fn3 (HMM E-Value=1.2e-21) 31 1.3
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 29 3.9
SB_46344| Best HMM Match : ig (HMM E-Value=0.0082) 29 5.2
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 29 5.2
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 29 5.2
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 29 5.2
SB_53860| Best HMM Match : fn3 (HMM E-Value=3.6e-07) 28 6.9
SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12) 28 6.9
SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_22747| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06) 28 9.1
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 28 9.1
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 28 9.1
SB_13201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +1
Query: 457 IEEKRQRLEEAEKKRQAMLQAMKDA 531
+EE+R+RLE EK+RQA QAM++A
Sbjct: 319 LEEERKRLENLEKERQAAQQAMQEA 343
>SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3)
Length = 1168
Score = 32.3 bits (70), Expect = 0.42
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = +1
Query: 454 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEX 633
++EEK++RL+ E+ + ++ +A K+ASK+ + T + +S N ++ K ++
Sbjct: 427 EVEEKKRRLQRYERLQSSLNEAYKEASKSSVDGT-RDESRNEEITQTSCNETSGKTPIKE 485
Query: 634 E 636
E
Sbjct: 486 E 486
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +1
Query: 457 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 624
+EE+R+R EEAEKKR+ + ++ + + KK E L QLER K +++
Sbjct: 252 MEEERKRKEEAEKKREEEERKRREEEEAAQKW---KKEEL--LRQQQLEREKEEQE 302
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 31.1 bits (67), Expect = 0.97
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXEX 639
EE+RQ+ EEA K+R+ L A K++SK+ +K E G + + ++ TK +
Sbjct: 1344 EERRQKREEARKRREEKL-AKKESSKSSNK---RKSKERSGNPSFKRIKSTTKGRETEVT 1399
Query: 640 KISLSIRIKPLTIEGLSVDKLRQ 708
K S + + +S+ + R+
Sbjct: 1400 KDSPVVESSDKSCSDMSIKRSRK 1422
>SB_56444| Best HMM Match : fn3 (HMM E-Value=1.2e-21)
Length = 651
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 122 LVVYRVSHG*KSVTQSLGTGSWTGSTATLECGVRGXP 12
LV++R S + + + T SW G +L+C RG P
Sbjct: 336 LVLFRSSDKPEMLDSTQNTSSWNGRLLSLQCTARGSP 372
>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2391
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 510 APGHE--RCQQDRTQLHHPKEERKLRFEQ 590
APGH+ RC QD +L+ K ERK R EQ
Sbjct: 1105 APGHQPLRCLQDVEELYLSKVERKDRLEQ 1133
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXEX 639
EE+R++ EEAE++R+ + K + +QK+ + +R + ++Q E
Sbjct: 636 EERRRQQEEAERQRREQEEVFKQQEQQRQQLELQKRQQEQQRQQELQKRQQEEKQRMAEM 695
Query: 640 K 642
+
Sbjct: 696 R 696
>SB_46344| Best HMM Match : ig (HMM E-Value=0.0082)
Length = 181
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 74 LGTGSWTGSTATLECGVRGXP 12
+ T SW G +L+C VRG P
Sbjct: 1 MNTSSWDGKVLSLQCKVRGLP 21
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXEX 639
++KR+R E+ K+RQ L+ K+ + I+K+ Q ER + KE+ E +
Sbjct: 914 KDKREREEKERKRRQQQLE--KEKKEKEKKLLIEKEKRE---KEKQKERLREKEEKEKQK 968
Query: 640 KISLSIRIKPLTIEGLSVDKLRQK 711
+ R K L DKL +K
Sbjct: 969 EAE---RAKKEKERLLQEDKLHEK 989
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 496 KRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXEXKISLSIR 660
+++A +++K+ + TIQ+ E+F +LE K KEQ E S +++
Sbjct: 214 QQKAQQESLKETLQEQEKETIQQLEEDFKAQLNELEVEKAKEQTALEEMKSFTVK 268
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 454 DIEEKRQRLEEAEKKRQAMLQAMKD 528
D+EEK + LEEA+ + +A+ MKD
Sbjct: 522 DLEEKAKELEEAKSENEAISGKMKD 546
>SB_53860| Best HMM Match : fn3 (HMM E-Value=3.6e-07)
Length = 288
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 86 VTQSLGTGSWTGSTATLECGVRGXP 12
V+ + T SW G +L+C RG P
Sbjct: 2 VSSTTNTSSWDGKVLSLQCKARGVP 26
>SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE 630
EEKR EEA K+++++ + + + K T +K+ E ++ N+ ++ E
Sbjct: 459 EEKRTESEEAPKRKKSLKRRLSFSRKNKAKKTEEKQDEEGEAREGTMDDNEVSQKPE 515
>SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 28.3 bits (60), Expect = 6.9
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGL-SNAQLERNKTKEQLEXE 636
E+ +++ +++ ++ D S G + K+S FG+ S AQL R T LE +
Sbjct: 63 EKSYYKVDIPSSEQRITVEERSDDSTRG-HLGSPKESNEFGIPSYAQLGR--TAYSLESK 119
Query: 637 XKISLSIRIKPLTIEGLSVDKLRQKAXELWECIV 738
K S + + + S+ LRQKA E ECI+
Sbjct: 120 YKHSEFLETRRTS----SIAVLRQKAKEHEECIL 149
>SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12)
Length = 519
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 92 KSVTQSLGTGSWTGSTATLECGVRGXP 12
K ++ T SW G +L+C RG P
Sbjct: 368 KDGASTMNTSSWDGKVLSLQCKARGLP 394
>SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +1
Query: 190 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRA 309
PA ++EGEG+P+ +R+ Q + ++Q K + +K ++
Sbjct: 56 PANEEEGEGEPKPKRRKAQPSAPKEKQTKSRKRDKKKDKS 95
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 27.9 bits (59), Expect = 9.1
Identities = 28/149 (18%), Positives = 57/149 (38%), Gaps = 1/149 (0%)
Frame = +1
Query: 199 KQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXX 378
++E + E KR++++R +E+ K+ E RKQR + +++
Sbjct: 449 EEEERREEEERKREEEERKQREEEEKKREEEERKQREEEERKQKEKEEEKKRKEEERKHK 508
Query: 379 XXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTI 558
+ ++R+R E EKK + ++ K T+
Sbjct: 509 EEEEKKTEESYDDSWRGRRARRKAEEERKERERRERLEKKHSEPEKKTEEPPKVVVEPTV 568
Query: 559 QKKSENFGLSNAQLERNKTKEQ-LEXEXK 642
+K+ ++E KT+E+ L+ E K
Sbjct: 569 EKEPA------VKVESEKTEEEPLDDEAK 591
>SB_22747| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06)
Length = 337
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 391 RGAFLLRHEKPCAWPASL*GV 329
RGA L R+E PC W A L G+
Sbjct: 69 RGAALQRNEPPCMWIAILNGI 89
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 27.9 bits (59), Expect = 9.1
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +1
Query: 457 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEXE 636
+EE+RQR E EK RQ + +A + + + K E LS A+ E+ K K+Q E
Sbjct: 442 LEEERQRQAEEEKIRQ---REEAEARRLEKDRKARLKQEGKLLSKAEKEK-KAKQQAMLE 497
Query: 637 XKISLSIRIKPL 672
I I L
Sbjct: 498 AMKQQGIEIPAL 509
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 27.9 bits (59), Expect = 9.1
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +1
Query: 454 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSN---AQLERNKTKEQ 624
++ RQ+L+EAE K +++ + K N Q N L N + + N KE
Sbjct: 546 EVSMTRQKLQEAEAKIRSLQEECK-------NLESQLNMANTDLKNIREKEFKLNSEKEN 598
Query: 625 LEXEXKIS---LSIRIKPLTIEGLSVDKLRQKAXE 720
L E K S L +I LT E S+ K+R K +
Sbjct: 599 LLTEGKTSSQKLQSKINTLTDENNSL-KVRLKTTD 632
>SB_13201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +1
Query: 454 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEX 633
DI K++ EE +KKR+ + ++ + +KKS + +AQ+E + + QLE
Sbjct: 252 DIGIKQKNPEECQKKRRKRRNLVSPEAEVNAKRSQEKKSVSL---SAQIEPD-LRNQLER 307
Query: 634 EXKISLSIRIKPL 672
E + L+ + + L
Sbjct: 308 ERRNDLNTKFQKL 320
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.131 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,555,723
Number of Sequences: 59808
Number of extensions: 258834
Number of successful extensions: 949
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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