Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_B01
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    27   0.13 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   1.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.5  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 605 RNDTETWVFREPTVSVFRDVEQYSVAPKPRQPKTLF 712
           R   + + FR P   V +     S +P+PR P++LF
Sbjct: 266 RQPLDLYNFRVPQHQVLQSPSSTSSSPEPRSPESLF 301


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect(2) = 1.8
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -3

Query: 772 EIRLQQLLQVIAELHVEVSVEQCLRLARFGRDAVLLHVPEHA 647
           E+    LLQ+I  L    S+E C  +      A     P HA
Sbjct: 159 EMTRVSLLQLIKSLRQSSSLEHCTLIGEDNISAKNPWFPRHA 200



 Score = 20.6 bits (41), Expect(2) = 1.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 583 AEVAISHKYVDGLP 542
           AE+A ++KY D +P
Sbjct: 237 AEIAFAYKYGDPIP 250


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 711 NSVFGWRGLGATLYCS 664
           N +FGW  L  TLY S
Sbjct: 275 NDIFGWSFLLFTLYSS 290


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 711 NSVFGWRGLGATLYCS 664
           N +FGW  L  TLY S
Sbjct: 201 NDIFGWSFLLFTLYSS 216


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 637 ADSQRVPGRGAIQRR 681
           ADS+R+P R A+++R
Sbjct: 75  ADSRRLPLRDAVEKR 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,676
Number of Sequences: 336
Number of extensions: 3833
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)