Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_B01
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p...    29   3.9  
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z81551-1|CAB04483.2|  335|Caenorhabditis elegans Hypothetical pr...    29   5.1  

>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical protein
            C47A10.1 protein.
          Length = 1294

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = -3

Query: 676  AVLLHVPEHADCRLPENPGLCVVPGNHSHAYAEVAIS----HKYVDGLPDAKL*VVGGSA 509
            A++   P   D  + EN    + PG ++H   E A S    HK++D LPD     VG   
Sbjct: 1109 ALVSQEPILFDTSIRENIVYGLQPGEYTHEQIETACSKANIHKFIDELPDGYETRVGEKG 1168

Query: 508  AQ 503
             Q
Sbjct: 1169 TQ 1170


>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
            protein C47A10.1 protein.
          Length = 1294

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
 Frame = -3

Query: 676  AVLLHVPEHADCRLPENPGLCVVPGNHSHAYAEVAIS----HKYVDGLPDAKL*VVGGSA 509
            A++   P   D  + EN    + PG ++H   E A S    HK++D LPD     VG   
Sbjct: 1109 ALVSQEPILFDTSIRENIVYGLQPGEYTHEQIETACSKANIHKFIDELPDGYETRVGEKG 1168

Query: 508  AQ 503
             Q
Sbjct: 1169 TQ 1170


>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
           protein T07D4.4a protein.
          Length = 1022

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 403 KLHNVNASTNLAEVGVASRCDGADPHSSAAGGS 501
           K  N N S+N + +  +S C  A P S++AGGS
Sbjct: 289 KPSNENISSNSSALSSSSSCFAAKPTSTSAGGS 321


>Z81551-1|CAB04483.2|  335|Caenorhabditis elegans Hypothetical
           protein F56A12.1 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 662 VEQYSVAPKPRQPKTLFDG-DFHMEFCDNLKQLLQAYFRD 778
           VE+Y +  K   PKT++DG +    F D+ ++ L+ +FR+
Sbjct: 199 VEKYRLRRKFPAPKTIWDGEEIVYSFKDSSRKFLKQFFRN 238


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,450,683
Number of Sequences: 27780
Number of extensions: 383553
Number of successful extensions: 1054
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)