Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_B01
(798 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 28 0.087
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 3.3
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 22 5.7
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 5.7
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 5.7
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 5.7
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 22 7.6
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 28.3 bits (60), Expect = 0.087
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 412 NVNASTNLAEVGVASRCDGADPHSSAAGGSS 504
N +ST AE G +CD + PH G S
Sbjct: 238 NFLSSTRTAETGTIRKCDESSPHDQVIIGGS 268
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 501 LCAALPPTTQSLASGRPSTY 560
L A + P+TQ++ GRP+T+
Sbjct: 308 LGAEIEPSTQTIDFGRPATF 327
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.8 bits (49), Expect = 1.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 486 CCWW*LCAALPPTTQSLASG 545
CCWW +C + TT ++ G
Sbjct: 488 CCWWKICWTI--TTPAICVG 505
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.8 bits (49), Expect = 1.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 486 CCWW*LCAALPPTTQSLASG 545
CCWW +C + TT ++ G
Sbjct: 541 CCWWKICWTI--TTPAICVG 558
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 3.3
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -3
Query: 631 ENPGLCVVPGNH-SHAYAEVAISHKYVD 551
ENPG VPG+H HA + + K D
Sbjct: 330 ENPGPPGVPGDHGDHAPKQTEVRFKVHD 357
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 3.3
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -3
Query: 631 ENPGLCVVPGNH-SHAYAEVAISHKYVD 551
ENPG VPG+H HA + + K D
Sbjct: 330 ENPGPPGVPGDHGDHAPKQTEVRFKVHD 357
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 22.2 bits (45), Expect = 5.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 579 SAYACEWFPGTTQRPGF 629
+AY+C W+ G+ + F
Sbjct: 190 AAYSCHWYDGSEEAKTF 206
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.2 bits (45), Expect = 5.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 353 SSFTEFH*TSELLLKHIDNDNILLYPQHLR*VHH 252
SS H T + ID L PQHL +HH
Sbjct: 482 SSLLFVHDTKNAGIWMIDFAKTLPLPQHLPRIHH 515
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.2 bits (45), Expect = 5.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 353 SSFTEFH*TSELLLKHIDNDNILLYPQHLR*VHH 252
SS H T + ID L PQHL +HH
Sbjct: 397 SSLLFVHDTKNAGIWMIDFAKTLPLPQHLPRIHH 430
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 5.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 353 SSFTEFH*TSELLLKHIDNDNILLYPQHLR*VHH 252
SS H T + ID L PQHL +HH
Sbjct: 716 SSLLFVHDTKNAGIWMIDFAKTLPLPQHLPRIHH 749
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +1
Query: 502 SVPRCHPRLRAWRREGHQHIYEIWLP 579
+VP C P+L + + H+ +I +P
Sbjct: 147 TVPVCAPKLHVFDLKTSNHLKQIEIP 172
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,365
Number of Sequences: 438
Number of extensions: 4681
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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