Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_A21
         (781 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.   120   2e-29
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   7.4  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score =  120 bits (289), Expect = 2e-29
 Identities = 61/143 (42%), Positives = 84/143 (58%)
 Frame = +1

Query: 307 IGEPLYPAHANVPADSSYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGDDPPSIANSP 486
           IGEP    H++   D SYDFI+VGGG+A  V+A RL+EV+NW VLL+EAG D P+ A  P
Sbjct: 52  IGEPCQRVHSSRIPDLSYDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDEPAGAEIP 111

Query: 487 GYSLITSTLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYD 666
               +      +W Y+  N+  +       S    RGK LGG++  + M Y RG+R DY+
Sbjct: 112 SNLQLYLGGDLDWKYYTTNESHACLSTG-GSCYWPRGKNLGGTTLHHGMAYHRGHRKDYE 170

Query: 667 NWAENGNEGWDWNTVIQYFKKSE 735
            W + G  GW W+ V+ Y+ KSE
Sbjct: 171 RWVQQGAFGWSWDEVMPYYLKSE 193


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 617 VPSTLCFTSEGTGLITTIGPKTETKAGTGIQSFSTLRK 730
           +P+T+  T+  T   T     T T   TG+    TL++
Sbjct: 103 LPATITTTTTTTTTTTATAAATATTTATGLIKQETLQR 140


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/44 (22%), Positives = 22/44 (50%)
 Frame = +1

Query: 175 LKSAKTFECVLIMFLQAIALFQVKILIPILEVIQLLIIALSSFE 306
           + + + F+ V I+F   +   ++   I  +EV+ +L    S F+
Sbjct: 414 IDTCEMFDSVSILFSDVVTFTEICSRITPMEVVSMLNAMYSLFD 457


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,620
Number of Sequences: 438
Number of extensions: 4125
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)