Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_A18
         (791 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106583-2|AAD03129.2|  255|Caenorhabditis elegans Hypothetical ...   300   8e-82
Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical pr...    33   0.31 
Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z27078-1|CAA81587.2|  628|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF040652-5|AAB95022.2|  378|Caenorhabditis elegans Hypothetical ...    29   5.0  
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>AF106583-2|AAD03129.2|  255|Caenorhabditis elegans Hypothetical
           protein F23C8.5 protein.
          Length = 255

 Score =  300 bits (736), Expect = 8e-82
 Identities = 145/239 (60%), Positives = 180/239 (75%), Gaps = 1/239 (0%)
 Frame = +3

Query: 78  RVLVGVKXVIDYAVKIRVKPDKSGVVTDGVKHSMNPFDEIAVEEAVRMKEKKLASEVIAV 257
           ++LVGVK V+DYAVKIRVKPD+SGVVT+GV+HSMNPFDEIA+EEAV++KEKKLA+EV+A 
Sbjct: 2   KILVGVKRVVDYAVKIRVKPDRSGVVTEGVQHSMNPFDEIALEEAVKLKEKKLATEVVAF 61

Query: 258 SCGPSQAQETLRTALAMGADRAIHVEVAGAEYDTLQPIHVAKILAKLSQDEKADLVIVGK 437
           S G  ++ E LRTALA GAD+A+HV+V  AE   L+  HVAK L K+ + EK D V +GK
Sbjct: 62  SLGGPKSAEVLRTALAKGADKAVHVQVTDAEAGKLESFHVAKALQKIVEQEKFDAVFLGK 121

Query: 438 QAIDDDSNQTAQMTAALLDWPQGTFASKIEKTD-GALTITREIDGGLEVIKTKIPAVLSA 614
           QAIDDDS+QTA + A LL+WPQ  +ASK+E    G + +TREIDGGL+ IK K+P VLSA
Sbjct: 122 QAIDDDSSQTAPILAGLLEWPQALYASKVEDAGAGHMKVTREIDGGLDTIKVKVPFVLSA 181

Query: 615 DLRLNEPRYATLPNIMXXXXXXXXXXXXXDLGVDLAPRIKVVSVEDPPXRQAGSIIPDV 791
           DLRLNEPRYATLPNIM             DL VD+ P+ + + V +PP RQAG  + DV
Sbjct: 182 DLRLNEPRYATLPNIMKAKKKPLKNIPIKDLNVDITPQTETLEVTEPPVRQAGGFVDDV 240


>Z81533-8|CAB04332.1|  917|Caenorhabditis elegans Hypothetical
           protein F36G9.13 protein.
          Length = 917

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
 Frame = +3

Query: 84  LVGVKXVIDYAVKIRVKPDK-SGVVTDGVKHSMNPFDEIA--VEEAVRMKEKKLASEVIA 254
           L GVK + ++  ++R   DK   V T+   H+M     +   +E+ +  K+ K   + I 
Sbjct: 321 LSGVKTLTNFGSELRKLDDKWRPVTTENHYHTMKKMSALQNHLEKTMTSKKIKATVDRIK 380

Query: 255 VSCGPSQAQETLRTALAMGADRA 323
            +CG   A++ L   +  G D A
Sbjct: 381 DNCGTGDAEDGLTRKIREGVDNA 403


>Z27078-2|CAA81588.3|  788|Caenorhabditis elegans Hypothetical
           protein K04H4.2b protein.
          Length = 788

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 233 VSKRSHCSLLWTITSTGNSQNCSCDGCRSSYSC*SG 340
           +S++    L+ T +S  NS  CS   C + Y C SG
Sbjct: 163 LSRQQASGLVCTFSSCSNSNPCSVGTCNNGYCCSSG 198


>Z27078-1|CAA81587.2|  628|Caenorhabditis elegans Hypothetical
           protein K04H4.2a protein.
          Length = 628

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 233 VSKRSHCSLLWTITSTGNSQNCSCDGCRSSYSC*SG 340
           +S++    L+ T +S  NS  CS   C + Y C SG
Sbjct: 163 LSRQQASGLVCTFSSCSNSNPCSVGTCNNGYCCSSG 198


>Z79756-9|CAK12562.1|  830|Caenorhabditis elegans Hypothetical
           protein F53C11.5c protein.
          Length = 830

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
 Frame = +3

Query: 228 KKLASEVIAVSCGPSQAQETLRTALAMGADRAIHVEVA-GAEYDTLQPIHVAKILAKLSQ 404
           KK  +    V+ G  + + +L+ A    A+    V++A  A +D       A   +K ++
Sbjct: 254 KKSNATAFTVNLG-EEKEVSLQEAARTLAENRRKVKLAKSASHDRTPSTPDAIAASKTNK 312

Query: 405 DEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGG 572
           +   + ++ GK AID+ SN+   +   +++ P+  F ++ E     +  ++  +GG
Sbjct: 313 NYLLERLLTGKTAIDN-SNEEEYVEGEIVETPEEQFDARSEALTFVIDTSKRNNGG 367


>Z79756-8|CAB02122.1|  891|Caenorhabditis elegans Hypothetical
           protein F53C11.5b protein.
          Length = 891

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
 Frame = +3

Query: 228 KKLASEVIAVSCGPSQAQETLRTALAMGADRAIHVEVA-GAEYDTLQPIHVAKILAKLSQ 404
           KK  +    V+ G  + + +L+ A    A+    V++A  A +D       A   +K ++
Sbjct: 315 KKSNATAFTVNLG-EEKEVSLQEAARTLAENRRKVKLAKSASHDRTPSTPDAIAASKTNK 373

Query: 405 DEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGG 572
           +   + ++ GK AID+ SN+   +   +++ P+  F ++ E     +  ++  +GG
Sbjct: 374 NYLLERLLTGKTAIDN-SNEEEYVEGEIVETPEEQFDARSEALTFVIDTSKRNNGG 428


>Z79756-7|CAK12561.1|  855|Caenorhabditis elegans Hypothetical
           protein F53C11.5a protein.
          Length = 855

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
 Frame = +3

Query: 228 KKLASEVIAVSCGPSQAQETLRTALAMGADRAIHVEVA-GAEYDTLQPIHVAKILAKLSQ 404
           KK  +    V+ G  + + +L+ A    A+    V++A  A +D       A   +K ++
Sbjct: 279 KKSNATAFTVNLG-EEKEVSLQEAARTLAENRRKVKLAKSASHDRTPSTPDAIAASKTNK 337

Query: 405 DEKADLVIVGKQAIDDDSNQTAQMTAALLDWPQGTFASKIEKTDGALTITREIDGG 572
           +   + ++ GK AID+ SN+   +   +++ P+  F ++ E     +  ++  +GG
Sbjct: 338 NYLLERLLTGKTAIDN-SNEEEYVEGEIVETPEEQFDARSEALTFVIDTSKRNNGG 392


>AF040652-5|AAB95022.2|  378|Caenorhabditis elegans Hypothetical
           protein T05A8.5 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -3

Query: 546 LEHHQSFLSLMQMFLVANLIKQQSSVLSGWSHHL 445
           L H+Q+ L+  ++ L   LI+Q S  +SG SH L
Sbjct: 344 LIHYQAKLTAQRVILDVQLIQQHSMAMSGSSHAL 377


>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
           protein K04H4.2c protein.
          Length = 1446

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 257 LLWTITSTGNSQNCSCDGCRSSYSC*SG 340
           L+ T +S  NS  CS   C + Y C SG
Sbjct: 685 LVCTFSSCSNSNPCSVGTCNNGYCCSSG 712


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,581,434
Number of Sequences: 27780
Number of extensions: 372395
Number of successful extensions: 1025
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)