Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_A16
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 268 5e-72
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 195 4e-50
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 127 9e-30
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 119 3e-27
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 91 1e-18
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 38 0.010
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 38 0.010
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 29 3.3
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 4.4
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 28 7.7
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 268 bits (656), Expect = 5e-72
Identities = 132/251 (52%), Positives = 169/251 (67%)
Frame = +1
Query: 112 SXKVSLNXVVIASAVSTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGN 291
S +S I A TP+ + AA+ER + I+EV++G
Sbjct: 16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Query: 292 VCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGM 471
VC AN GQAPARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGM
Sbjct: 76 VCQANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGM 135
Query: 472 ESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDE 651
ESMS VPFY++RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ ITR+DQDE
Sbjct: 136 ESMSQVPFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDE 195
Query: 652 YAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEXYKRVNFEKFTKLSTVFQK 831
YA+NSYK+SA A+E E+VPV V K+G ++ +DE + +VNF+KFT L TVFQK
Sbjct: 196 YAINSYKKSAKAWENGNIGPEVVPVNVKSKKGVTIV-DKDEEFTKVNFDKFTSLRTVFQK 254
Query: 832 ENGTVTAGNAS 864
+ GT+TA NAS
Sbjct: 255 D-GTITAANAS 264
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 195 bits (475), Expect = 4e-50
Identities = 106/244 (43%), Positives = 144/244 (59%), Gaps = 1/244 (0%)
Frame = +1
Query: 136 VVIASAVSTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLGQ 315
V I S TP+ AAIER+G+ E+I+EV G V A LGQ
Sbjct: 6 VFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLPAGLGQ 65
Query: 316 APARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPF 495
RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+MS VPF
Sbjct: 66 NVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENMSQVPF 125
Query: 496 YLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKR 675
Y+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K ITR++QD YA+ SYK+
Sbjct: 126 YVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAIESYKK 185
Query: 676 SAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEXYKRVNFEKFTKLSTVFQKE-NGTVTA 852
++ A+ ++ F +E+VPV V R + V+ EDE YK++ K + L VF ++ GT+T
Sbjct: 186 ASNAWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKKLIESKVSSLKPVFVRDGTGTITP 244
Query: 853 GNAS 864
NAS
Sbjct: 245 ANAS 248
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 127 bits (307), Expect = 9e-30
Identities = 75/214 (35%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Frame = +1
Query: 232 AAIERAGIPKEEIKEVYIGNV-CSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKS 408
AA++ A + + + V GNV S+ G +R + +G+P++ TVN++C SG ++
Sbjct: 38 AALKHANVGADAVDHVIFGNVVASSRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQA 97
Query: 409 IMLAAQGLQTGAQDIILAGGMESMSNVPFYLK--RGETSYGGMQLVDGIVFDGLTDVYNK 582
++ AAQ ++ G +I+LAGG E+MS VPF ++ R T+ G + +++D L+D Y K
Sbjct: 98 VVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAK 157
Query: 583 FHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIF 762
MG AE + ++TRQ+ DE+A+ S A EA + +E+V + + ++G F
Sbjct: 158 LAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRKGEE-SF 216
Query: 763 AEDEXYKRVNFEKFTKLSTVFQKENGTVTAGNAS 864
DE + E KL VFQK+ G V AGNAS
Sbjct: 217 EIDEHPRATTAESLAKLKPVFQKD-GLVNAGNAS 249
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 119 bits (286), Expect = 3e-27
Identities = 69/159 (43%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
Frame = +1
Query: 112 SXKVSLNXVVIASAVSTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKE--VYI 285
S +S I A TP+ + AA+ER + I+E V++
Sbjct: 94 SAALSNKDAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEANVFL 153
Query: 286 GNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAG 465
G VC AN GQA ARQA + AGL S TTVNK +SGMK+I+LAAQ +QTG QD+ + G
Sbjct: 154 GQVCHANAGQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIILAAQQIQTGHQDLAIGG 213
Query: 466 GMESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNK 582
GMESMS VPF+L R E S Q V+ V DG++D ++K
Sbjct: 214 GMESMSQVPFFLARVEQSSNKYQ-VEQTVQDGISDFFDK 251
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 90.6 bits (215), Expect = 1e-18
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 18/268 (6%)
Frame = +1
Query: 118 KVSLNXVVIASAVSTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVC 297
K ++ +V+ AV TP + A +E+ +P E++ + G V
Sbjct: 20 KKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQLDHIICGTVI 79
Query: 298 SANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMES 477
AR+A + AG+P TV C S ++ L TG + I+AGG+E
Sbjct: 80 QECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNANAIIAGGVEL 139
Query: 478 MSNVPF-YLKRGETSYGGM--------------QLVDGIV---FDGLTDVYNKFHMGNCA 603
+S+VP Y + + GM Q+V ++ + + MG+
Sbjct: 140 LSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSG 199
Query: 604 ENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEXYK 783
+ A ++R++QDE+A+ S+ ++ A + F D +VPV + K+ P ED +
Sbjct: 200 DRLAAAFNVSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK--PKTIKEDNGIR 256
Query: 784 RVNFEKFTKLSTVFQKENGTVTAGNASH 867
EK + L F K +GTVTA NAS+
Sbjct: 257 VSTLEKLSSLKPAFVKPHGTVTAANASY 284
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +1
Query: 226 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 405
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 406 SIMLAAQGLQTGAQDIILAGGMESMS 483
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +1
Query: 226 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 405
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 406 SIMLAAQGLQTGAQDIILAGGMESMS 483
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +3
Query: 294 LFCKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 449
L C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 450 YN 455
YN
Sbjct: 242 YN 243
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 538 VDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAV 660
+DG++F L + N FH C AK+++I R D+ ++ +
Sbjct: 72 LDGLLFQFLDEALNSFHAEPCF--VAKRVEILRFDKKKFEI 110
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 330 SCNICRFAKKYHMYNCKQSMCLWHEI 407
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 694 AKAFVDELVPVPVPQKRGAPVIFAEDEXYKRVNFEKFTKLSTVFQKENGTVT 849
A AFV + VP+ Q RG +FA+ ++ + F+K +S NG+V+
Sbjct: 169 AAAFVSGMTAVPI-QIRGR-TLFAQYSTHRELKFDKNKAISDTESVANGSVS 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,262,628
Number of Sequences: 27780
Number of extensions: 378817
Number of successful extensions: 1125
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -