Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P15_F_A14
(866 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0011 - 7337618-7338496,7338596-7338991 66 3e-11
11_02_0012 - 7346282-7347136,7347234-7347593 58 1e-08
04_04_0619 + 26652923-26653267,26653440-26654273 55 6e-08
01_01_1152 + 9170628-9171899 54 1e-07
01_06_0824 - 32243495-32244319,32244449-32244859 53 3e-07
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 52 8e-07
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 50 2e-06
11_02_0014 - 7352619-7352918,7353173-7353418 48 7e-06
11_01_0750 - 6315126-6315896,6316371-6316784 44 2e-04
11_01_0767 + 6438648-6438809,6439146-6440000 43 4e-04
11_01_0771 + 6453130-6454488 38 0.014
05_06_0044 - 25150322-25151260 34 0.17
03_05_0294 + 22855503-22855946,22856346-22856399 31 1.6
02_05_0997 + 33382756-33382861,33383070-33383161,33383936-333841... 29 6.4
01_06_0887 + 32733300-32734565 29 6.4
07_01_0731 - 5566878-5567513 28 8.4
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 28 8.4
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 66.1 bits (154), Expect = 3e-11
Identities = 50/156 (32%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Frame = +1
Query: 412 LDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIP--DD--DTIRXXXXXXXXXX 579
+ KN+V SP S LAL+ G +ELL LG DD +++R
Sbjct: 27 VSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADE 86
Query: 580 XXIKGVTFNVANKIYIKEGDYELDPTLKKDAVEVFDADFEKVNFDNGAAAAGL-INKWVE 756
G + A ++ E EL P + A + A NF + INKWV
Sbjct: 87 SASGGPRVSDACGVWHDE-TLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVS 145
Query: 757 NKTNERIKDLLSEDSLDSFTRLVLVNALYFXGTWQN 864
TN+ I ++L + S+ T LVLVNA+YF G W N
Sbjct: 146 KATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSN 181
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 57.6 bits (133), Expect = 1e-08
Identities = 43/150 (28%), Positives = 68/150 (45%)
Frame = +1
Query: 415 DKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPDDDTIRXXXXXXXXXXXXIKG 594
+ +NVV SP+S LAL+ G +EL+ LG D + +
Sbjct: 28 NSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEESVRRAVEVG--LAD 85
Query: 595 VTFNVANKIYIKEGDYELDPTLKKDAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNER 774
+ + ++ G + + K A ADF++ ++ INKWV TN+
Sbjct: 86 ESESGGPRVSYACGVWHDERLALKPAYRA--ADFQR----QPKSSRKKINKWVSKATNKL 139
Query: 775 IKDLLSEDSLDSFTRLVLVNALYFXGTWQN 864
I+++L + S+ T LVLVNA+YF G W N
Sbjct: 140 IREILPDGSVHGGTALVLVNAIYFKGKWSN 169
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 55.2 bits (127), Expect = 6e-08
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Frame = +1
Query: 412 LDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPDDDTIRXXXXXXXXXXXXIK 591
+ ++ N + SPL LAL+ GT +LL LG +
Sbjct: 16 ITEQSNFMFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP 75
Query: 592 GVTFNVANKIYIKEGDYELDPTLKKDAVEVFDADFEKVNFDNGA-AAAGLINKWVENKTN 768
++F A I++ + L P + A A V+F N A AAA +N+++ TN
Sbjct: 76 QLSF--AAGIFV-DRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATN 132
Query: 769 ERIKDLLSEDSLDSFTRLVLVNALYFXGTW 858
R+ + +S + S T+ VL NA++F TW
Sbjct: 133 GRLNNTISPGTFGSSTKCVLANAMHFKATW 162
>01_01_1152 + 9170628-9171899
Length = 423
Score = 54.4 bits (125), Expect = 1e-07
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 2/147 (1%)
Frame = +1
Query: 424 KNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPD-DDTIRXXXXXXXXXXXXIKGVT 600
+N + SPLS LAL+ G ELL LG P + R + +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 601 FNVANKIYIKEGDYELDPTLKKDAVEVFDADFEKVNF-DNGAAAAGLINKWVENKTNERI 777
F A +++ G L P A + A E +F A +N +V + T I
Sbjct: 119 F--ACGVWVDRGR-ALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLI 175
Query: 778 KDLLSEDSLDSFTRLVLVNALYFXGTW 858
+D+L +S+DS T +VL NA++F GTW
Sbjct: 176 RDVLPPNSVDSSTVVVLANAVHFKGTW 202
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 52.8 bits (121), Expect = 3e-07
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Frame = +1
Query: 424 KNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPD--------DDTIRXXXXXXXXXX 579
KN+ SPLS LAL+ G ++++ LG
Sbjct: 32 KNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGPG 91
Query: 580 XXIKGVTFNVANKIYIKEGDYELDPTLKKDAVEVFDADFEKVNF-DNGAAAAGLINKWVE 756
G AN +++ + L + + + A+ V+F D A IN+W E
Sbjct: 92 DDRGGPKVRFANGVWV-DAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 757 NKTNERIKDLLSEDSLDSFTRLVLVNALYFXGTWQN 864
+ T RIKD L +D++D T VL NALYF G W++
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWES 186
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +1
Query: 721 AAAAGLINKWVENKTNERIKDLLSEDSLDSFTRLVLVNALYFXGTW 858
A A +N WVE T+ IK++L S+D TRLVL NALYF G W
Sbjct: 211 AEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAW 256
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 721 AAAAGLINKWVENKTNERIKDLLSEDSLDSFTRLVLVNALYFXGTW 858
A G +N WV+ T+ IK++ + S++ T+LVL NALYF G W
Sbjct: 463 AEVLGQVNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAW 508
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 424 KNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIP 531
+NV SPLS L+L+ G ++L ++LG P
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGP 70
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = +1
Query: 721 AAAAGLINKWVENKTNERIKDLLSEDSLDSFTRLVLVNALYFXGTW 858
A A +N WV+ T+ IK++L S+D TRLVL NALYF G W
Sbjct: 3 AEVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAW 48
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 48.4 bits (110), Expect = 7e-06
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 739 INKWVENKTNERIKDLLSEDSLDSFTRLVLVNALYFXGTWQN 864
IN+WV TN+ I ++L + S+ T LVLVNA+YF G W +
Sbjct: 90 INEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSD 131
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 646 LDPTLKKDAVEVFDADFEKVNFDNGAA-AAGLINKWVENKTNERIKDLLSEDSLDSFTRL 822
L P A V+ + +K +F N A IN WV++ T + LL ++D T L
Sbjct: 114 LSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQNTGL 173
Query: 823 VLVNALYFXGTW 858
VL +ALYF G W
Sbjct: 174 VLGSALYFRGRW 185
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 42.7 bits (96), Expect = 4e-04
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 631 EGDYELDPTLKKDAVEVFDADFEKVNFDNGAAAAGL-INKWVENKTNERIKDLLSEDSLD 807
+ Y L P + V + V+F N A IN WV T I +++ +S
Sbjct: 25 DASYSLKPAYRDAIVGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQS 84
Query: 808 SFTRLVLVNALYFXGTW 858
TR V+ NA+YF G W
Sbjct: 85 VDTRHVVGNAIYFKGEW 101
>11_01_0771 + 6453130-6454488
Length = 452
Score = 37.5 bits (83), Expect = 0.014
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 739 INKWVENKTNERIKDLLSEDSLDSFTRLVLVNALYFXGTW 858
IN W T + I D+L S+ T +VL NA+YF G W
Sbjct: 177 INAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKW 216
>05_06_0044 - 25150322-25151260
Length = 312
Score = 33.9 bits (74), Expect = 0.17
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Frame = +1
Query: 631 EGDYELDPTLKKDAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLS---EDS 801
+ L+P A VF A N AAA IN+W ++T +KD+LS +D
Sbjct: 6 DASLRLNPAFADTAASVFKAAVRSAG--NPAAARAEINEWFSSQTGGFVKDILSNSIDDD 63
Query: 802 LDS--------FTRLVLVNALYFXGTWQN 864
D + L N+LYF W +
Sbjct: 64 DDGSGGGGGAISASVFLANSLYFNAYWDH 92
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 427 NVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPDDDT 543
NV SPLS L+L+ G ++L++ LG+P T
Sbjct: 45 NVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGT 83
>02_05_0997 +
33382756-33382861,33383070-33383161,33383936-33384175,
33384820-33384900,33384974-33385113,33385462-33385622,
33385700-33385800,33385895-33385969,33386218-33386488,
33386657-33386697,33386922-33387004,33387100-33387189,
33387721-33387825,33388023-33388161,33388467-33388670,
33388837-33388908,33389189-33389273,33389374-33389480
Length = 730
Score = 28.7 bits (61), Expect = 6.4
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 322 LLEIKNPVLSMDSKALSSAITKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGT-TDPA 498
L+E+ LSM +K SSA+ F+ KF + L S+E + GT T PA
Sbjct: 237 LVEVVRSSLSMMAKQWSSAMNLFNEKF-SALPSLIAAHGMESSSEDEFMSLLFGTRTSPA 295
Query: 499 -HEELLTSLG 525
H+ L++SLG
Sbjct: 296 LHQFLVSSLG 305
>01_06_0887 + 32733300-32734565
Length = 421
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 598 TFNVANKIYIKEGDYELDPTLKK--DAVEVFDADFEKVNFDNGAAAAGLIN 744
TFN+ N+I ++ EL P K + ++ A F +G AGLIN
Sbjct: 123 TFNLPNRIQLEREALELAPEEKPLLHRLVIYTATLSSDPFMDGCVVAGLIN 173
>07_01_0731 - 5566878-5567513
Length = 211
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 646 LDPTLKKDAVEVFDADFEKVNFDNG 720
LD D VE+ DADFE +FD+G
Sbjct: 95 LDYVYDDDDVELVDADFEDGSFDDG 119
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -1
Query: 593 PFIDF--NFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNG 441
PF+ F +DD +++R V+S I +SCAGSV+ + ++ +K D G
Sbjct: 84 PFLYFMVQYDDILFHEKRRVTSVTIDFTFGLNSCAGSVI-RDLHIAKQEEDIG 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,317,529
Number of Sequences: 37544
Number of extensions: 345879
Number of successful extensions: 778
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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