Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P15_F_A12
         (727 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    24   1.3  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    24   1.3  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    24   1.3  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    24   1.3  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    24   1.3  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    24   1.3  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    24   1.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          24   1.3  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          24   1.3  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          24   1.3  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          24   1.3  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          24   1.3  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          24   1.3  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          24   1.3  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    24   1.3  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    23   2.9  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    23   2.9  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    23   2.9  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    23   2.9  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    23   2.9  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   3.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   3.9  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    23   3.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.0  

>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 36  RRRYSRSREREQKSYK-NEREYREY 59


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 36  RRRYSRSREREQKSYK-NEREYREY 59


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 36  RRRYSRSREREQKSYK-NEREYREY 59


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 36  RRRYSRSREREQKSYK-NEREYREY 59


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 36  RRRYSRSREREQKSYK-NEREYREY 59


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 36  RRRYSRSREREQKSYK-NEREYREY 59


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 36  RRRYSRSREREQKSYK-NEREYREY 59


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 285 RRRYSRSREREQKSYK-NEREYREY 308


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 285 RRRYSRSREREQKSYK-NEREYREY 308


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 285 RRRYSRSREREQKSYK-NEREYREY 308


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 285 RRRYSRSREREQKSYK-NEREYREY 308


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 285 RRRYSRSREREQKSYK-NEREYREY 308


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 285 RRRYSRSREREQKSYK-NEREYREY 308


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 284 RRRYSRSREREQKSYK-NEREYREY 307


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           RRR+S+ R+  ++SY  N R YR Y
Sbjct: 285 RRRYSRSREREQKSYK-NEREYREY 308


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           R+R+S+ R+  K+SY  N   YR Y
Sbjct: 36  RKRYSRSREREKKSYK-NENSYRKY 59


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           R+R+S+ R+  K+SY  N   YR Y
Sbjct: 36  RKRYSRSREREKKSYK-NENSYRKY 59


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           R+R+S+ R+  K+SY  N   YR Y
Sbjct: 36  RKRYSRSREREKKSYK-NENSYRKY 59


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           R+R+S+ R+  K+SY  N   YR Y
Sbjct: 36  RKRYSRSREREKKSYK-NENSYRKY 59


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           R+R+S+ R+  K+SY  N   YR Y
Sbjct: 269 RKRYSRSREREKKSYK-NENSYRKY 292


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 444 FDGISDDGDLREDLXKSIAECYRSDSNFSSQAT 542
           F+G  D G+  E + + IAE +  ++  +   T
Sbjct: 70  FNGYDDGGNFNEVVIREIAEIFLDENGVNKLIT 102


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 540 TSDITNDEEFQATALVQFMDILNDLDEVL 626
           T+D+  +EE + +  VQ   +  DLDE L
Sbjct: 347 TADVLQEEEEEYSPSVQHEFVTFDLDEPL 375


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 650 RRRHSKLRQXRKRSYL*N*RMYRGY 724
           R+R+S+ R+  +RSY  N   YR Y
Sbjct: 269 RKRYSRSREREQRSYK-NENSYRKY 292


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 453 ISDDGDLREDLXKSIAECYRSDSNFSSQA 539
           ++ +  LRE   K   +  RS++N SSQ+
Sbjct: 239 VNHEKALREQAKKMNVDSLRSNANTSSQS 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,517
Number of Sequences: 438
Number of extensions: 3192
Number of successful extensions: 30
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)