Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P24
         (674 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q38BF9 Cluster: Putative uncharacterized protein; n=1; ...    38   0.29 
UniRef50_Q6LFB4 Cluster: Putative uncharacterized protein; n=2; ...    35   1.6  
UniRef50_A4VEF0 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  
UniRef50_Q897Z0 Cluster: Exonuclease sbcC; n=1; Clostridium teta...    35   2.1  
UniRef50_Q05FV1 Cluster: 6-phosphogluconate dehydrogenase; n=1; ...    34   2.7  
UniRef50_Q4YUD8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_UPI000023DA7B Cluster: hypothetical protein FG11360.1; ...    33   4.8  
UniRef50_Q8GPI5 Cluster: YdbT-like protein; n=1; Staphylococcus ...    33   4.8  

>UniRef50_Q38BF9 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 223

 Score = 37.5 bits (83), Expect = 0.29
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -1

Query: 197 MCKLHRICV-ELFIFKFKNHIKSSFFFCIFLCYVWNYHDIVYC-ACMFYKLVSVIAYHF 27
           +C +H  CV  +F+F   N +  +FFF +F   VW   D+V+   C F+ L+ V  + F
Sbjct: 84  LCVVHLFCVCFVFVFIRINILLPTFFFLLFRFAVWLRGDLVFVFFCFFFSLLFVFFFPF 142


>UniRef50_Q6LFB4 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 2528

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = -1

Query: 185 HRICVELFIFKFKNHIKSSFFFCIFLCYVWNYHDIVYCACMFYKLVSVIAYHFKF 21
           + IC+ LF+FK K  I+  FFF  FL Y    ++   C  ++Y ++  +  +F F
Sbjct: 439 YNICLFLFLFK-KEDIEEYFFFFFFLFYFLLLNNNKSCIVIYYDILLHLYDYFSF 492


>UniRef50_A4VEF0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 463

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = -1

Query: 179 ICVELFIFKFKNHIK--SSFFFCIFLCYVWNY----HDIVYCACMFYKLVSVIAYHFKF 21
           IC  L IFK+KN+ +    FFF +FL +   +    H   +  C +Y+L ++I  +F F
Sbjct: 299 ICFGLDIFKYKNYFQKLKLFFFLLFLLFFSLFFNLTHHFFFNFCFYYQLNNLIISYFFF 357


>UniRef50_Q897Z0 Cluster: Exonuclease sbcC; n=1; Clostridium
           tetani|Rep: Exonuclease sbcC - Clostridium tetani
          Length = 1045

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 29  NDMRSHLRVYRTYMRNIQYHGNSKHNTKRYKRK 127
           NDMR   + Y +Y+ NI+ HGN K N  + ++K
Sbjct: 456 NDMRDFYKYYNSYLINIKKHGNLKINFDKIEKK 488


>UniRef50_Q05FV1 Cluster: 6-phosphogluconate dehydrogenase; n=1;
           Candidatus Carsonella ruddii PV|Rep: 6-phosphogluconate
           dehydrogenase - Carsonella ruddii (strain PV)
          Length = 433

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 173 VELFIFKFKNHIKSSFFFCIFLCYVWNYHDIV 78
           + + IFK    +K +FFFCIF CY+  ++ I+
Sbjct: 297 ISILIFK----VKKTFFFCIFFCYLQGFNQII 324


>UniRef50_Q4YUD8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 136

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 200 CMCKLHRICVELFIFKFKNH--IKSSFFFCIFLCYVWNY 90
           C C    + ++ F FK K    I + +FF +FL Y++NY
Sbjct: 8   CNCSYINLNIQFFFFKKKKEKGILNPYFFSVFLSYIYNY 46


>UniRef50_UPI000023DA7B Cluster: hypothetical protein FG11360.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG11360.1 - Gibberella zeae PH-1
          Length = 269

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +2

Query: 29  NDMRSHLRVYRTYMRNIQ--YHGNSKHNTKRYKRKTNF*YGF 148
           N+  + +++ +TY+   Q  YH    HN + YKR   F YGF
Sbjct: 52  NNGNTSIKMTQTYIPGYQGRYHSEVHHNNRGYKRNDEFFYGF 93


>UniRef50_Q8GPI5 Cluster: YdbT-like protein; n=1; Staphylococcus
           aureus|Rep: YdbT-like protein - Staphylococcus aureus
          Length = 475

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
 Frame = -1

Query: 191 KLHRICVELFIFKFKNHIKSSFFFCIF----LCYVWNY-HDIVYCACMFYKLVSVIA--Y 33
           K+H + V L I+K   +I + + FC F    + ++  Y + IV     FY L S+I    
Sbjct: 7   KIHPLWVVLEIYKLIRNILALYIFCTFVLKKIIFINTYVYLIVIIIIFFYSLSSIILSWV 66

Query: 32  HFKFEI 15
           HFKF++
Sbjct: 67  HFKFKL 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,762,146
Number of Sequences: 1657284
Number of extensions: 9923969
Number of successful extensions: 21678
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21659
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)