Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P24
         (674 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC090999-24|AAK26151.1|  502|Caenorhabditis elegans Hypothetical...    30   1.3  
Z35663-1|CAA84725.1|  324|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z99281-21|CAE18023.1|  181|Caenorhabditis elegans Hypothetical p...    29   3.0  
U55363-1|AAK71420.1|  340|Caenorhabditis elegans Serpentine rece...    28   5.3  
Z49068-2|CAA88855.1|  389|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U80029-8|ABC71800.1|  166|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AL023847-2|CAA19546.1|  359|Caenorhabditis elegans Hypothetical ...    27   9.2  
AC024882-9|AAF60930.2|  341|Caenorhabditis elegans Hypothetical ...    27   9.2  

>AC090999-24|AAK26151.1|  502|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.1 protein.
          Length = 502

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 119 CIFLCYVWNYHDIVYCACMFYKLVSVIAYHFKFEIHIF 6
           C++L   +N  +I YC+  F+KL+    YH K    IF
Sbjct: 306 CLYLIK-YNILEITYCSLEFHKLIQSSDYHKKLSRKIF 342


>Z35663-1|CAA84725.1|  324|Caenorhabditis elegans Hypothetical
           protein T04A8.1 protein.
          Length = 324

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = -3

Query: 354 AFFCLSTNFLVYNSILNLKILWVVFHPSKSSDSPF 250
           A + + +++L+  ++LN+ I++ VFH +   D+ F
Sbjct: 33  AMYGMQSSYLIVGAVLNVMIVYTVFHGNSYRDNSF 67


>Z99281-21|CAE18023.1|  181|Caenorhabditis elegans Hypothetical
           protein Y57G11C.40 protein.
          Length = 181

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 27  KMICDHTYEFIEHTCAIYNIMVIPNITQKDTKEKRTF-NMVFEFKN 161
           K  C    EF+  TC   N+   P+ TQ+D ++ +TF N++ E  N
Sbjct: 119 KQSCSSYSEFV--TCIEENLAKQPSCTQEDVEKFKTFSNLIIEICN 162


>U55363-1|AAK71420.1|  340|Caenorhabditis elegans Serpentine
           receptor, class h protein30 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -2

Query: 181 GSVLNYLFLNSKTILKVRFSFVSFCVMFGI--TMILYIAHVCSIN 53
           G + +  F   K I+ + F + + C+ FGI  T+ +Y   V ++N
Sbjct: 113 GILTHITFYRMKIIIPMSFRYYTRCIQFGILSTVAMYTGAVLTVN 157


>Z49068-2|CAA88855.1|  389|Caenorhabditis elegans Hypothetical
           protein K01C8.2 protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = +2

Query: 536 YNRILFILQFYYTFI 580
           Y++ILFIL FY++FI
Sbjct: 2   YDKILFILSFYFSFI 16


>U80029-8|ABC71800.1|  166|Caenorhabditis elegans Hypothetical
           protein T20D4.20 protein.
          Length = 166

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 360 C*VSNNLATDKYPIYQKKGQCKLTPHSFRIWR 455
           C + N L+TD  P   K G  K  P  F+ W+
Sbjct: 74  CEIMNFLSTDFNPCLAKLGNLKPVPECFKEWK 105


>AL023847-2|CAA19546.1|  359|Caenorhabditis elegans Hypothetical
           protein Y57A10C.4 protein.
          Length = 359

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = -1

Query: 485 IYFITVFFYNSPY-SETVRC*FALSFFLVNR--VFVCC*IIRNSAIRH 351
           I+++ +FFYN PY ++       L F++++   VFV C I+    + H
Sbjct: 13  IFWLPIFFYNEPYWAQCAISSAELPFYMLSAYVVFVSCRIMLKIQLFH 60


>AC024882-9|AAF60930.2|  341|Caenorhabditis elegans Hypothetical
           protein Y9C9A.5 protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 104 YVWNYHDIVYCACMFYKLVSVIAYHFKFE 18
           Y  N  DI YC C+FY L      H  ++
Sbjct: 171 YGANVSDITYCGCVFYPLDETGVPHLDYK 199


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,810,624
Number of Sequences: 27780
Number of extensions: 270918
Number of successful extensions: 643
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)