Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_P23
         (771 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.2  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +2

Query: 338 STSSVHQVLILQYLHP 385
           S SS H VLI Q LHP
Sbjct: 56  SPSSAHTVLIPQPLHP 71


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/42 (21%), Positives = 16/42 (38%)
 Frame = -2

Query: 740 SDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTSRKRVSKPP 615
           S  S  G++P +       W P+  ++     T+      PP
Sbjct: 417 STPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTTEAPP 458


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 311 SVIMLCHQFSTSSVHQ 358
           +VI+ CH  S   VHQ
Sbjct: 170 NVILACHMLSFLMVHQ 185


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 704 ILLVQRPALTHPNLLRXTL 760
           + L Q PAL+ PNLL  +L
Sbjct: 455 VSLSQVPALSTPNLLSLSL 473


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 311 SVIMLCHQFSTSSVHQVLILQYLHPILH 394
           +++  CH  S SS HQ ++  + +P+ H
Sbjct: 329 AMVNRCHPLSLSSDHQAML--HHNPMSH 354


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,859
Number of Sequences: 336
Number of extensions: 3607
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)